Gene EcDH1_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1509 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1637570 
End bp1639090 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content45% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX39179 
Protein GI260448757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.521077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGCT CAACGACTCC GTCCTCCGGG GAATACTTGT TGGAAATGAG CGGTATCAAC 
AAGTCCTTTC CTGGTGTTAA GGCACTTGAT AACGTTAATT TAAAAGTCCG GCCACATTCT
ATCCATGCAT TAATGGGGGA AAACGGTGCA GGAAAATCGA CATTATTAAA ATGCCTGTTT
GGTATTTATC AAAAAGACTC CGGCACCATT TTATTCCAGG GTAAAGAGAT CGATTTCCAT
TCTGCAAAAG AAGCCCTGGA AAATGGTATT TCGATGGTAC ACCAGGAGTT AAACCTGGTA
TTACAACGTT CGGTGATGGA TAACATGTGG CTGGGGCGAT ATCCCACCAA AGGCATGTTT
GTCGATCAGG ACAAAATGTA CCGCGAAACC AAAGCGATTT TTGACGAACT GGATATTGAT
ATCGATCCGC GTGCGCGCGT CGGCACATTA TCCGTTTCGC AAATGCAGAT GATCGAAATC
GCCAAAGCGT TTTCCTATAA CGCGAAAATT GTGATTATGG ATGAACCGAC TTCTTCGTTA
ACCGAAAAAG AGGTCAATCA TCTGTTCACT ATTATTCGTA AATTAAAAGA GCGCGGCTGC
GGTATTGTTT ATATCTCGCA TAAAATGGAA GAAATCTTCC AGTTATGTGA TGAAGTTACC
GTATTGCGCG ACGGTCAGTG GATCGCCACC GAACCGCTGG CAGGACTGAC GATGGACAAG
ATCATCGCCA TGATGGTTGG GCGTTCTCTT AACCAGCGTT TCCCTGACAA AGAAAACAAA
CCGGGCGAAG TCATCCTCGA GGTACGTAAC CTGACGTCAC TGCGCCAGCC GTCGATTCGC
GATGTCTCGT TTGATCTGCA TAAAGGGGAG ATCCTCGGTA TTGCCGGTCT GGTGGGGGCG
AAACGTACCG ATATTGTTGA GACGTTATTT GGTATTCGCG AGAAATCGGC TGGCACCATA
ACGTTGCACG GCAAACAGAT CAATAACCAT AATGCCAACG AAGCCATAAA CCATGGATTT
GCACTGGTAA CTGAGGAGCG CCGCTCAACG GGAATTTATG CCTATCTGGA TATTGGTTTT
AACTCGTTAA TTTCCAATAT TCGCAACTAC AAAAATAAAG TTGGTTTACT GGATAACTCG
CGGATGAAAA GCGATACCCA GTGGGTGATT GATTCGATGC GGGTAAAAAC GCCGGGTCAT
CGGACGCAAA TTGGTTCGCT CTCCGGTGGT AATCAGCAAA AGGTGATTAT TGGTCGCTGG
CTACTAACGC AACCAGAAAT ATTAATGCTC GATGAACCGA CGCGCGGTAT TGATGTCGGG
GCGAAGTTTG AAATTTATCA GTTAATTGCC GAACTGGCGA AGAAAGGCAA GGGGATTATT
ATTATCTCCT CTGAAATGCC TGAGTTGTTA GGGATAACAG ACCGTATTCT GGTCATGAGC
AATGGTCTCG TTTCCGGAAT TGTCGATACA AAAACAACAA CGCAAAACGA AATTCTGCGT
CTTGCGTCTT TGCACCTTTA A
 
Protein sequence
MVSSTTPSSG EYLLEMSGIN KSFPGVKALD NVNLKVRPHS IHALMGENGA GKSTLLKCLF 
GIYQKDSGTI LFQGKEIDFH SAKEALENGI SMVHQELNLV LQRSVMDNMW LGRYPTKGMF
VDQDKMYRET KAIFDELDID IDPRARVGTL SVSQMQMIEI AKAFSYNAKI VIMDEPTSSL
TEKEVNHLFT IIRKLKERGC GIVYISHKME EIFQLCDEVT VLRDGQWIAT EPLAGLTMDK
IIAMMVGRSL NQRFPDKENK PGEVILEVRN LTSLRQPSIR DVSFDLHKGE ILGIAGLVGA
KRTDIVETLF GIREKSAGTI TLHGKQINNH NANEAINHGF ALVTEERRST GIYAYLDIGF
NSLISNIRNY KNKVGLLDNS RMKSDTQWVI DSMRVKTPGH RTQIGSLSGG NQQKVIIGRW
LLTQPEILML DEPTRGIDVG AKFEIYQLIA ELAKKGKGII IISSEMPELL GITDRILVMS
NGLVSGIVDT KTTTQNEILR LASLHL