Gene EcDH1_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1508 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1636511 
End bp1637509 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content51% 
IMG OID 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionACX39178 
Protein GI260448756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.944041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAGA AGGTGTTAAC CCTGTCTGCT GTGATGGCCA GCATGTTATT CGGTGCCGCT 
GCACACGCTG CTGATACTCG CATTGGTGTA ACAATCTATA AGTACGACGA TAACTTTATG
TCTGTAGTGC GCAAGGCTAT TGAGCAAGAT GCGAAAGCCG CGCCAGATGT TCAGCTGCTG
ATGAATGATT CTCAGAATGA CCAGTCCAAG CAGAACGATC AGATCGACGT ATTGCTGGCG
AAAGGGGTGA AGGCACTGGC AATCAACCTG GTTGACCCGG CAGCTGCGGG TACGGTGATT
GAGAAAGCGC GTGGGCAAAA CGTGCCGGTG GTTTTCTTCA ACAAAGAACC GTCTCGTAAG
GCGCTGGATA GCTACGACAA AGCCTACTAC GTTGGCACTG ACTCCAAAGA GTCCGGCATT
ATTCAAGGCG ATTTGATTGC TAAACACTGG GCGGCGAATC AGGGTTGGGA TCTGAACAAA
GACGGTCAGA TTCAGTTCGT ACTGCTGAAA GGTGAACCGG GCCATCCGGA TGCAGAAGCA
CGTACCACTT ACGTGATTAA AGAATTGAAC GATAAAGGCA TCAAAACTGA ACAGTTACAG
TTAGATACCG CAATGTGGGA CACCGCTCAG GCGAAAGATA AGATGGACGC CTGGCTGTCT
GGCCCGAACG CCAACAAAAT CGAAGTGGTT ATCGCCAACA ACGATGCGAT GGCAATGGGC
GCGGTTGAAG CGCTGAAAGC ACACAACAAG TCCAGCATTC CGGTGTTTGG CGTCGATGCG
CTGCCAGAAG CGCTGGCGCT GGTGAAATCC GGTGCACTGG CGGGCACCGT ACTGAACGAT
GCTAACAACC AGGCGAAAGC GACCTTTGAT CTGGCGAAAA ACCTGGCCGA TGGTAAAGGT
GCGGCTGATG GCACCAACTG GAAAATCGAC AACAAAGTGG TCCGCGTACC TTATGTTGGC
GTAGATAAAG ACAACCTGGC TGAATTCAGC AAGAAATAA
 
Protein sequence
MNKKVLTLSA VMASMLFGAA AHAADTRIGV TIYKYDDNFM SVVRKAIEQD AKAAPDVQLL 
MNDSQNDQSK QNDQIDVLLA KGVKALAINL VDPAAAGTVI EKARGQNVPV VFFNKEPSRK
ALDSYDKAYY VGTDSKESGI IQGDLIAKHW AANQGWDLNK DGQIQFVLLK GEPGHPDAEA
RTTYVIKELN DKGIKTEQLQ LDTAMWDTAQ AKDKMDAWLS GPNANKIEVV IANNDAMAMG
AVEALKAHNK SSIPVFGVDA LPEALALVKS GALAGTVLND ANNQAKATFD LAKNLADGKG
AADGTNWKID NKVVRVPYVG VDKDNLAEFS KK