Gene EcDH1_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1501 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1627316 
End bp1628122 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX39171 
Protein GI260448749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000205194 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCGT TGTCGCAATC AGCAGTGAGC GCAGCCTTGA CCGACCTGGA AGGGCAGCTT 
GGCGTGCAAC TGTTTGATCG CGTGGGGAAA AGACTGGTTG TTAATGAACA CGGGCGGCTG
CTCTATCCGC GTGCGTTGGC ATTGCTTGAA CAGGCGGTTG AAATCGAACA ACTGTTTCGC
GAAGACAACG GCGCGATTCG TATCTATGCC AGTAGTACCA TCGGTAACTA CATTCTGCCT
GCAGTTATCG CCCGTTATCG CCATGATTAT CCGCAGTTGC CGATTGAACT TAGCGTTGGG
AATAGCCAGG ACGTGATGCA AGCGGTGCTG GATTTCCGCG TTGATATTGG CTTTATTGAA
GGACCGTGCC ACAGCACTGA AATCATTTCT GAACCGTGGC TGGAAGACGA GCTGGTGGTT
TTCGCCGCGC CGACTTCGCC GTTGGCCCGT GGTCCGGTCA CCTTAGAACA GCTGGCCGCT
GCGCCGTGGA TCCTGCGTGA ACGCGGTTCC GGCACGCGGG AGATTGTCGA TTATCTGTTG
CTGTCACATT TACCGAAGTT TGAGATGGCG ATGGAATTAG GTAACTCCGA GGCAATCAAA
CATGCGGTGC GTCATGGGTT GGGAATTAGT TGCCTGTCGC GACGTGTGAT TGAAGATCAA
TTGCAGGCAG GCACATTAAG TGAAGTTGCG GTCCCTCTGC CGCGCCTGAT GCGTACGTTG
TGGCGTATAC ATCATCGGCA AAAACACCTT TCCAACGCGC TACGGCGCTT TCTGGACTAT
TGCGATCCCG CAAATGTGCC GCGTTAA
 
Protein sequence
MLALSQSAVS AALTDLEGQL GVQLFDRVGK RLVVNEHGRL LYPRALALLE QAVEIEQLFR 
EDNGAIRIYA SSTIGNYILP AVIARYRHDY PQLPIELSVG NSQDVMQAVL DFRVDIGFIE
GPCHSTEIIS EPWLEDELVV FAAPTSPLAR GPVTLEQLAA APWILRERGS GTREIVDYLL
LSHLPKFEMA MELGNSEAIK HAVRHGLGIS CLSRRVIEDQ LQAGTLSEVA VPLPRLMRTL
WRIHHRQKHL SNALRRFLDY CDPANVPR