Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1501 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1627316 |
End bp | 1628122 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | ACX39171 |
Protein GI | 260448749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000205194 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGCGT TGTCGCAATC AGCAGTGAGC GCAGCCTTGA CCGACCTGGA AGGGCAGCTT GGCGTGCAAC TGTTTGATCG CGTGGGGAAA AGACTGGTTG TTAATGAACA CGGGCGGCTG CTCTATCCGC GTGCGTTGGC ATTGCTTGAA CAGGCGGTTG AAATCGAACA ACTGTTTCGC GAAGACAACG GCGCGATTCG TATCTATGCC AGTAGTACCA TCGGTAACTA CATTCTGCCT GCAGTTATCG CCCGTTATCG CCATGATTAT CCGCAGTTGC CGATTGAACT TAGCGTTGGG AATAGCCAGG ACGTGATGCA AGCGGTGCTG GATTTCCGCG TTGATATTGG CTTTATTGAA GGACCGTGCC ACAGCACTGA AATCATTTCT GAACCGTGGC TGGAAGACGA GCTGGTGGTT TTCGCCGCGC CGACTTCGCC GTTGGCCCGT GGTCCGGTCA CCTTAGAACA GCTGGCCGCT GCGCCGTGGA TCCTGCGTGA ACGCGGTTCC GGCACGCGGG AGATTGTCGA TTATCTGTTG CTGTCACATT TACCGAAGTT TGAGATGGCG ATGGAATTAG GTAACTCCGA GGCAATCAAA CATGCGGTGC GTCATGGGTT GGGAATTAGT TGCCTGTCGC GACGTGTGAT TGAAGATCAA TTGCAGGCAG GCACATTAAG TGAAGTTGCG GTCCCTCTGC CGCGCCTGAT GCGTACGTTG TGGCGTATAC ATCATCGGCA AAAACACCTT TCCAACGCGC TACGGCGCTT TCTGGACTAT TGCGATCCCG CAAATGTGCC GCGTTAA
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Protein sequence | MLALSQSAVS AALTDLEGQL GVQLFDRVGK RLVVNEHGRL LYPRALALLE QAVEIEQLFR EDNGAIRIYA SSTIGNYILP AVIARYRHDY PQLPIELSVG NSQDVMQAVL DFRVDIGFIE GPCHSTEIIS EPWLEDELVV FAAPTSPLAR GPVTLEQLAA APWILRERGS GTREIVDYLL LSHLPKFEMA MELGNSEAIK HAVRHGLGIS CLSRRVIEDQ LQAGTLSEVA VPLPRLMRTL WRIHHRQKHL SNALRRFLDY CDPANVPR
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