| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1426 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | + |
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| Start bp | 1532851 |
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| End bp | 1536555 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | ACX39097 |
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| Protein GI | 260448675 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.221475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCAT CTCTTTTCTC TGCTAACGGT GTCGCGGCGG TCACTGATTC ATGCCAGGGA
TATGATGTCA AAGCGAGTTG TCAGGCCAGC AGGCAAAGCC TTTCAGGCAT TACGCAGGAC
TGGAGTATCG CTGATGGGCA ATGGCTGGTT TTTTCGGATA TGACCAATAA CGCCAGCGGT
GGGGCCGTAT TTTTGCAACA AGGAGCGGAA TTTTCACTAT TACCAGAAAA TGAAACTGGA
ATGACTCTGT TTGCCAATAA CACCGTTACA GGAGAATATA ATAACGGCGG GGCCATATTT
GCTAAAGAAA ACTCAACGCT GAATCTTACT GATGTTATTT TTTCCGGTAA CGTCGCAGGC
GGCTATGGTG GCGCAATCTA TTCTTCTGGT ACTAACGATA CTGGTGCCGT CGATTTACGT
GTCACTAACG CCATGTTTCG CAATAACATC GCTAATGATG GCAAAGGTGG CGCAATTTAT
ACCATTAATA ATGACGTTTA TTTAAGTGAT GTTATTTTTG ATAACAACCA GGCATATACA
TCAACAAGTT ACAGTGATGG CGATGGCGGG GCAATCGATG TTACCGATAA TAATAGCGAC
AGCAAGCATC CTTCAGGTTA TACGATAGTA AATAACACTG CCTTTACAAA TAACACTGCC
GAAGGTTATG GCGGGGCGAT ATATACCAAT AGCGTGACGG CTCCCTATCT TATTGATATT
TCTGTTGATG ACAGCTACAG CCAGAACGGA GGCGTGTTAG TCGATGAGAA CAATAGCGCA
GCAGGCTATG GAGATGGTCC TTCCTCTGCG GCGGGTGGCT TTATGTATCT CGGCTTAAGT
GAAGTTACCT TTGATATTGC CGACGGAAAA ACGCTGGTTA TTGGCAATAC AGAGAATGAC
GGAGCTGTTG ACTCTATTGC TGGTACCGGG TTAATCACCA AAACAGGTTC CGGCGATCTG
GTACTTAATG CAGATAACAA TGACTTTACT GGTGAGATGC AGATTGAAAA CGGTGAAGTT
ACCCTGGGCC GCAGCAACTC CCTGATGAAT GTCGGCGATA CGCATTGCCA GGACGATCCG
CAAGACTGCT ACGGTCTGAC GATAGGGAGT ATTGATCAGT ATCAGAATCA GGCTGAGCTA
AACGTTGGCT CGACCCAACA AACTTTTGTG CACGCATTGA CGGGCTTTCA GAATGGCACT
TTAAATATCG ATGCTGGTGG CAACGTTACT GTTAATCAGG GCAGTTTTGC TGGCATCATC
GAAGGTGCTG GTCAGCTCAC CATTGCGCAA AACGGCAGCT ACGTGCTGGC AGGGGCGCAG
TCGATGGCGC TAACCGGCGA TATAGTCGTT GATGATGGTG CGGTGCTTTC GCTGGAAGGC
GACGCGGCAG ATCTTACCGC TCTCCAGGAC GATCCGCAGT CGATCGTGTT AAACGGCGGT
GTGCTCGATC TCTCTGATTT CTCCACCTGG CAGAGCGGCA CATCATACAA CGATGGCCTT
GAAGTCAGTG GCAGCAGCGG AACGGTTATC GGCAGTCAGG ATGTGGTAGA TCTTGCAGGT
GGCGACAATT TGCATATCGG CGGCGACGGG AAAGATGGCG TCTACGTGGT GGTCGATGCG
AGCGACGGGC AGGTAAGTCT GGCAAACAAT AATAGTTATT TGGGCACAAC ACAAATCGCC
TCCGGTACGC TGATGGTGAG CGACAACTCG CAGCTTGGAG ATACCCACTA TAACCGCCAG
GTTATCTTTA CCGATAAGCA ACAAGAAAGC GTGATGGAGA TTACCTCCGA CGTTGACACG
CGTTCAGATG CGGCAGGCCA CGGACGTGAT ATTGAAATGC GCGCCGACGG TGAAGTGGCA
GTTGATGCGG GGGTAGACAC GCAGTGGGGC GCACTGATGG CTGACAGCAG CGGGCAGCAT
CAGGATGAGG GTAGCACATT GACTAAAACG GGGGCTGGTA CACTGGAGCT GACCGCCAGC
GGTACAACGC AGTCGGCGGT ACGTGTCGAA GAAGGCACCC TGAAAGGTGA TGTTGCTGAT
ATCCTTCCTT ATGCTTCGTC ACTGTGGGTT GGTGATGGGG CAACGTTCGT TACTGGCGCG
GATCAGGATA TTCAGTCAAT TGATGCTATT TCCAGCGGCA CTATCGACAT CAGCGATGGT
ACGGTTTTGC GCCTGACCGG GCAGGATACT TCCGTCGCCC TTAATGCCTC ACTATTTAAC
GGCGATGGGA CGCTGGTGAA TGCCACCGAT GGTGTGACGT TGACAGGTGA GCTTAATACC
AACCTTGAAA CTGACAGCCT GACTTATCTT TCCAACGTGA CGGTTAATGG CAATCTGACC
AATACGTCCG GTGCGGTTAG CCTGCAAAAT GGCGTCGCTG GCGATACGCT GACGGTAAAC
GGTGATTATA CCGGCGGCGG TACGCTACTG CTCGATAGCG AATTAAACGG CGATGACTCG
GTAAGCGATC AATTGGTGAT GAACGGTAAT ACTGCTGGCA ACACAACTGT GGTGGTTAAC
TCCATTACAG GGATTGGTGA GCCGACATCG ACAGGCATTA AAGTGGTTGA TTTCGCAGCT
GATCCCACGC AGTTTCAAAA CAATGCGCAG TTCAGTCTGG CAGGCAGCGG CTACGTCAAT
ATGGGAGCGT ATGACTACAC GCTGGTGGAA GATAACAACG ACTGGTATCT GCGATCGCAA
GAAGTAACGC CGCCATCGCC ACCTGATCCA GACCCGACTC CCGATCCTGA TCCCACGCCG
GATCCTGATC CAACACCCGA CCCGGAACCT ACGCCTGCTT ACCAGCCGGT GTTGAATGCC
AAAGTTGGCG GTTATCTTAA TAACCTGCGG GCGGCAAATC AGGCGTTTAT GATGGAGCGA
CGCGATCACG CAGGTGGCGA TGGTCAGACG CTGAATTTAC GTGTTATCGG CGGAGATTAT
CATTACACAG CAGCGGGGCA ACTGGCTCAA CATGAAGACA CTTCTACGGT GCAACTTAGC
GGCGATCTGT TTAGCGGGCG CTGGGGCACG GATGGCGAGT GGATGCTTGG GATTGTTGGT
GGCTACAGCG ATAACCAGGG CGACAGCCGC TCGAATATGA CCGGAACTCG CGCCGATAAC
CAGAACCACG GTTATGCCGT TGGGCTGACA TCAAGCTGGT TTCAGCACGG TAATCAGAAG
CAAGGGGCCT GGCTGGATAG CTGGCTGCAA TACGCGTGGT TTAGCAATGA TGTTTCCGAA
CAAGAAGATG GCACAGATCA TTACCACTCG TCGGGGATTA TCGCCTCGCT GGAGGCGGGG
TATCAGTGGT TACCGGGGCG TGGTGTGGTG ATTGAACCGC AGGCGCAGGT GATTTATCAG
GGCGTGCAGC AGGATGATTT TACCGCCGCT AACCGTGCGC GCGTGTCACA ATCGCAGGGT
GATGATATTC AGACGCGGCT GGGTTTACAC AGCGAATGGC GTACCGCTGT TCATGTCATA
CCAACATTAG ATCTGAATTA TTATCACGAT CCCCATTCGA CGGAAATTGA AGAGGATGGC
AGCACTATCA GTGACGATGC GGTGAAGCAA CGGGGTGAAA TAAAAGTGGG AGTCACGGGC
AATATCAGTC AGCGAGTGTC CCTGCGCGGC AGCGTGGCGT GGCAGAAAGG GAGTGATGAT
TTTGCCCAGA CGGCAGGGTT TTTGTCGATG ACGGTGAAAT GGTAA
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| Protein sequence | MIASLFSANG VAAVTDSCQG YDVKASCQAS RQSLSGITQD WSIADGQWLV FSDMTNNASG
GAVFLQQGAE FSLLPENETG MTLFANNTVT GEYNNGGAIF AKENSTLNLT DVIFSGNVAG
GYGGAIYSSG TNDTGAVDLR VTNAMFRNNI ANDGKGGAIY TINNDVYLSD VIFDNNQAYT
STSYSDGDGG AIDVTDNNSD SKHPSGYTIV NNTAFTNNTA EGYGGAIYTN SVTAPYLIDI
SVDDSYSQNG GVLVDENNSA AGYGDGPSSA AGGFMYLGLS EVTFDIADGK TLVIGNTEND
GAVDSIAGTG LITKTGSGDL VLNADNNDFT GEMQIENGEV TLGRSNSLMN VGDTHCQDDP
QDCYGLTIGS IDQYQNQAEL NVGSTQQTFV HALTGFQNGT LNIDAGGNVT VNQGSFAGII
EGAGQLTIAQ NGSYVLAGAQ SMALTGDIVV DDGAVLSLEG DAADLTALQD DPQSIVLNGG
VLDLSDFSTW QSGTSYNDGL EVSGSSGTVI GSQDVVDLAG GDNLHIGGDG KDGVYVVVDA
SDGQVSLANN NSYLGTTQIA SGTLMVSDNS QLGDTHYNRQ VIFTDKQQES VMEITSDVDT
RSDAAGHGRD IEMRADGEVA VDAGVDTQWG ALMADSSGQH QDEGSTLTKT GAGTLELTAS
GTTQSAVRVE EGTLKGDVAD ILPYASSLWV GDGATFVTGA DQDIQSIDAI SSGTIDISDG
TVLRLTGQDT SVALNASLFN GDGTLVNATD GVTLTGELNT NLETDSLTYL SNVTVNGNLT
NTSGAVSLQN GVAGDTLTVN GDYTGGGTLL LDSELNGDDS VSDQLVMNGN TAGNTTVVVN
SITGIGEPTS TGIKVVDFAA DPTQFQNNAQ FSLAGSGYVN MGAYDYTLVE DNNDWYLRSQ
EVTPPSPPDP DPTPDPDPTP DPDPTPDPEP TPAYQPVLNA KVGGYLNNLR AANQAFMMER
RDHAGGDGQT LNLRVIGGDY HYTAAGQLAQ HEDTSTVQLS GDLFSGRWGT DGEWMLGIVG
GYSDNQGDSR SNMTGTRADN QNHGYAVGLT SSWFQHGNQK QGAWLDSWLQ YAWFSNDVSE
QEDGTDHYHS SGIIASLEAG YQWLPGRGVV IEPQAQVIYQ GVQQDDFTAA NRARVSQSQG
DDIQTRLGLH SEWRTAVHVI PTLDLNYYHD PHSTEIEEDG STISDDAVKQ RGEIKVGVTG
NISQRVSLRG SVAWQKGSDD FAQTAGFLSM TVKW
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