| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1416 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1520261 |
|---|
| End bp | 1521451 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | glycerol-3-phosphate dehydrogenase, anaerobic, C subunit |
|---|
| Protein accession | ACX39087 |
|---|
| Protein GI | 260448665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.403336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA CCAGCTTCGA AAACTGCATT AAGTGCACCG TCTGCACCAC CGCCTGCCCG
GTGAGCCGGG TGAATCCCGG TTATCCAGGG CCAAAACAAG CCGGGCCGGA TGGCGAGCGT
CTGCGTTTGA AAGATGGCGC ACTGTATGAC GAGGCGCTGA AATATTGCAT CAACTGCAAA
CGTTGTGAAG TCGCCTGCCC GTCCGATGTG AAGATTGGCG ATATTATCCA GCGCGCGCGG
GCGAAATATG ACACCACGCG CCCGTCGCTG CGTAATTTTG TGTTGAGTCA TACCGACCTG
ATGGGTAGCG TTTCCACGCC GTTCGCACCA ATCGTCAACA CCGCTACCTC GCTGAAACCG
GTGCGGCAGC TGCTTGATGC GGCGTTAAAA ATCGATCATC GCCGCACGCT ACCGAAATAC
TCCTTCGGCA CGTTCCGTCG CTGGTATCGC AGCGTGGCGG CTCAGCAAGC ACAATATAAA
GACCAGGTCG CTTTCTTTCA CGGCTGCTTC GTTAACTACA ACCATCCGCA GTTAGGTAAA
GATTTAATTA AAGTGCTCAA CGCAATGGGT ACCGGTGTAC AACTGCTCAG CAAAGAAAAA
TGCTGCGGCG TACCGCTAAT CGCCAACGGC TTTACCGATA AAGCACGCAA ACAGGCAATT
ACGAATGTAG AGTCGATCCG CGAAGCTGTG GGAGTAAAAG GCATTCCGGT GATTGCCACC
TCCTCAACCT GTACATTTGC CCTGCGCGAC GAATACCCGG AAGTGCTGAA TGTCGACAAC
AAAGGCTTGC GCGATCATAT CGAACTGGCA ACCCGCTGGC TGTGGCGCAA GCTGGACGAA
GGCAAAACGT TACCGCTGAA ACCGCTGCCG CTGAAAGTGG TTTATCACAC TCCGTGCCAT
ATGGAAAAAA TGGGCTGGAC GCTCTACACC CTGGAGCTGT TGCGTAACAT CCCGGGGCTT
GAGTTAACGG TGCTGGATTC CCAGTGCTGC GGTATTGCGG GTACTTACGG TTTCAAAAAA
GAGAACTACC CCACCTCACA AGCCATCGGC GCACCACTGT TCCGCCAGAT AGAAGAAAGC
GGCGCAGATC TGGTGGTCAC CGACTGCGAA ACCTGTAAAT GGCAGATTGA GATGTCCACA
AGTCTTCGCT GCGAACATCC GATTACGCTA CTGGCCCAGG CGCTGGCTTA A
|
|---|
| Protein sequence | MNDTSFENCI KCTVCTTACP VSRVNPGYPG PKQAGPDGER LRLKDGALYD EALKYCINCK
RCEVACPSDV KIGDIIQRAR AKYDTTRPSL RNFVLSHTDL MGSVSTPFAP IVNTATSLKP
VRQLLDAALK IDHRRTLPKY SFGTFRRWYR SVAAQQAQYK DQVAFFHGCF VNYNHPQLGK
DLIKVLNAMG TGVQLLSKEK CCGVPLIANG FTDKARKQAI TNVESIREAV GVKGIPVIAT
SSTCTFALRD EYPEVLNVDN KGLRDHIELA TRWLWRKLDE GKTLPLKPLP LKVVYHTPCH
MEKMGWTLYT LELLRNIPGL ELTVLDSQCC GIAGTYGFKK ENYPTSQAIG APLFRQIEES
GADLVVTDCE TCKWQIEMST SLRCEHPITL LAQALA
|
|---|
| |