Gene EcDH1_1332 details

Gene Information

• Locus tag: EcDH1_1332
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 1433202
• End bp: 1435208
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 53%
• Product: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
• Protein accession: ACX39004
• Protein GI: 260448582

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.602375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACACT ACTCCATACA ACCTGCCAAC CTCGAATTTA ATGCTGAGGG TACACCTGTT 
TCCCGAGATT TTGACGATGT CTATTTTTCC AACGATAACG GGCTGGAAGA GACGCGTTAT 
GTTTTTCTGG GAGGCAACCA ATTAGAGGTA CGCTTTCCTG AGCATCCACA TCCTCTGTTT 
GTGGTAGCAG AGAGCGGCTT CGGCACCGGA TTAAACTTCC TGACGCTATG GCAGGCATTT 
GATCAGTTTC GCGAAGCGCA TCCGCAAGCG CAATTACAAC GCTTACATTT CATTAGTTTT 
GAGAAATTTC CCCTCACCCG TGCGGATTTA GCCTTAGCGC ATCAACACTG GCCGGAACTG 
GCTCCGTGGG CAGAACAACT TCAGGCGCAG TGGCCAATGC CCTTGCCCGG TTGCCATCGT 
TTATTGCTCG ATGAAGGCCG CGTGACGCTG GATTTATGGT TTGGCGATAT TAACGAACTG 
ACCAGCCAAC TGGACGATTC GCTAAATCAA AAAGTAGATG CCTGGTTTCT GGACGGCTTT 
GCGCCAGCGA AAAACCCGGA TATGTGGACG CAAAATCTGT TTAACGCCAT GGCAAGGTTG 
GCGCGTCCGG GCGGCACGCT GGCGACATTT ACGTCTGCCG GTTTTGTCCG CCGCGGTTTG 
CAGGACGCCG GATTCACGAT GCAAAAACGT AAGGGCTTTG GGCGCAAACG GGAAATGCTT 
TGCGGGGTGA TGGAACAGAC ATTACCGCTC CCCTGCTCCG CGCCGTGGTT TAACCGCACG 
GGCAGCAGCA AACGGGAAGC GGCGATTATC GGCGGTGGTA TTGCCAGCGC GTTGTTGTCG 
CTGGCGCTAT TACGGCGCGG CTGGCAGGTA ACGCTTTATT GCGCGGATGA GGCCCCCGCA 
CTGGGTGCTT CCGGCAATCG CCAGGGGGCG CTGTATCCGT TATTAAGCAA ACACGATGAG 
GCGCTAAACC GCTTTTTCTC TAATGCGTTT ACTTTTGCTC GTCGGTTTTA CGACCAATTA 
CCCGTTAAAT TTGATCATGA CTGGTGCGGC GTCACGCAGT TAGGCTGGGA TGAGAAAAGC 
CAGCATAAAA TCGCACAGAT GTTGTCAATG GATTTACCCG CAGAACTGGC TGTAGCCGTT 
GAGGCAAATG CGGTTGAACA AATTACGGGC GTTGCGACAA ATTGCAGCGG CATTACTTAT 
CCGCAAGGTG GTTGGCTGTG CCCAGCAGAA CTGACCCGTA ATGTGCTGGA ACTGGCGCAA 
CAGCAGGGTT TGCAGATTTA TTATCAATAT CAGTTACAGA ATTTATCCCG TAAGGATGAC 
TGTTGGTTGT TGAATTTTGC AGGAGATCAG CAAGCAACAC ACAGCGTAGT GGTACTGGCG 
AACGGGCATC AAATCAGCCG ATTCAGCCAA ACGTCGACTC TCCCGGTGTA TTCGGTTGCC 
GGGCAGGTCA GCCATATTCC GACAACGCCG GAATTGGCAG AGCTGAAGCA GGTGCTGTGC 
TATGACGGTT ATCTCACGCC ACAAAATCCG GCGAATCAAC ATCATTGTAT TGGTGCCAGT 
TATCATCGCG GCAGCGAAGA TACGGCGTAC AGTGAGGACG ATCAGCAGCA GAATCGCCAG 
CGGTTGATTG ATTGTTTCCC GCAGGCACAG TGGGCAAAAG AGGTTGATGT CAGTGATAAA 
GAGGCGCGCT GCGGTGTGCG TTGTGCCACC CGCGATCATC TGCCAATGGT AGGCAATGTT 
CCCGATTATG AGGCAACACT CGTGGAATAT GCGTCGTTGG CGGAGCAGAA AGATGAGGCG 
GTAAGCGCGC CGGTTTTTGA CGATCTCTTT ATGTTTGCGG CTTTAGGTTC TCGCGGTTTG 
TGTTCTGCCC CGCTGTGTGC CGAGATTCTG GCGGCGCAGA TGAGCGACGA ACCGATTCCG 
ATGGATGCCA GTACGCTGGC GGCGTTAAAC CCGAATCGGT TATGGGTGCG GAAATTGTTG 
AAGGGTAAAG CGGTTAAGGC GGGGTAA 

 

Protein sequence

MKHYSIQPAN LEFNAEGTPV SRDFDDVYFS NDNGLEETRY VFLGGNQLEV RFPEHPHPLF 
VVAESGFGTG LNFLTLWQAF DQFREAHPQA QLQRLHFISF EKFPLTRADL ALAHQHWPEL 
APWAEQLQAQ WPMPLPGCHR LLLDEGRVTL DLWFGDINEL TSQLDDSLNQ KVDAWFLDGF 
APAKNPDMWT QNLFNAMARL ARPGGTLATF TSAGFVRRGL QDAGFTMQKR KGFGRKREML 
CGVMEQTLPL PCSAPWFNRT GSSKREAAII GGGIASALLS LALLRRGWQV TLYCADEAPA 
LGASGNRQGA LYPLLSKHDE ALNRFFSNAF TFARRFYDQL PVKFDHDWCG VTQLGWDEKS 
QHKIAQMLSM DLPAELAVAV EANAVEQITG VATNCSGITY PQGGWLCPAE LTRNVLELAQ 
QQGLQIYYQY QLQNLSRKDD CWLLNFAGDQ QATHSVVVLA NGHQISRFSQ TSTLPVYSVA 
GQVSHIPTTP ELAELKQVLC YDGYLTPQNP ANQHHCIGAS YHRGSEDTAY SEDDQQQNRQ 
RLIDCFPQAQ WAKEVDVSDK EARCGVRCAT RDHLPMVGNV PDYEATLVEY ASLAEQKDEA 
VSAPVFDDLF MFAALGSRGL CSAPLCAEIL AAQMSDEPIP MDASTLAALN PNRLWVRKLL 
KGKAVKAG