Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1253 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1350116 |
End bp | 1351042 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | ACX38927 |
Protein GI | 260448505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0013481 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTATT CTTTAAAACA ATTAAAGGTT TTCGTCACAG TAGCGCAGGA GAAAAGTTTT AGTCGTGCAG GAGAGCGTAT CGGCCTGAGC CAGTCGGCAG TGAGTCACAG TGTGAAGGAA CTGGAAAATC ATACTGGTGT TCGCCTGCTG GACAGAACCA CGCGTGAAGT GGTGCTTACA GATGCAGGGC AGCAGCTGGC TTTGCGTCTT GAGCGACTGC TGGATGAACT GAACAGCACG TTGCGCGATA CCGGGCGTAT GGGGCAACAA CTGAGCGGAA AAGTTCGGGT CGCTGCCAGC CAGACCATTT CCGCGCATCT TATTCCGCAA TGCATTGCTG AAAGCCATCG CCGCTATCCA GATATTCAGT TTGTCCTGCA CGATCGTCCG CAGCAGTGGG TAATGGAAAG TATTCGCCAG GGAGATGTCG ATTTTGGCAT CGTCATCGAT CCAGGCCCAG TGGGCGATCT GCAATGTGAA GCGATTCTTT CCGAGCCTTT CTTTCTGCTT TGCCATCGCG ATAGCGCTTT GGCCGTGGAA GATTATGTAC CCTGGCAGGC ATTACAGGGA GCGAAATTGG TGTTGCAGGA TTACGCGTCA GGCAGCCGAC CGCTGATTGA CGCAGCGCTG GCGCGCAATG GTATTCAGGC GAATATTGTG CAGGAGATTG GACATCCGGC GACGCTGTTC CCGATGGTAG CCGCAGGCAT CGGCATCAGT ATTCTTCCCG CACTGGCGCT ACCATTGCCT GAAGGTAGCC CACTGGTGGT AAAGCGCATT ACGCCGGTTG TTGAACGCCA GTTGATGCTG GTGCGCAGGA AGAACCGTTC ACTTTCCACC GCCGCTGAAG CTTTATGGGA CGTGGTACGA GACCAGGGCA ATGCGCTAAT GGCTGGGCGG GAAGGGGATC CGTTGTATCA GATATAG
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Protein sequence | MNYSLKQLKV FVTVAQEKSF SRAGERIGLS QSAVSHSVKE LENHTGVRLL DRTTREVVLT DAGQQLALRL ERLLDELNST LRDTGRMGQQ LSGKVRVAAS QTISAHLIPQ CIAESHRRYP DIQFVLHDRP QQWVMESIRQ GDVDFGIVID PGPVGDLQCE AILSEPFFLL CHRDSALAVE DYVPWQALQG AKLVLQDYAS GSRPLIDAAL ARNGIQANIV QEIGHPATLF PMVAAGIGIS ILPALALPLP EGSPLVVKRI TPVVERQLML VRRKNRSLST AAEALWDVVR DQGNALMAGR EGDPLYQI
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