Gene EcDH1_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1226 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1323751 
End bp1324620 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionACX38900 
Protein GI260448478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACTT TTAAACCACT AAAAACACTC ACTTCGCGCC GCCAGGTGCT GAAAGCCGGT 
TTGGCTGCCC TGACGTTGTC AGGAATGTCG CAAGCCATCG CCAAAGACGA ACTTTTAAAA
ACCAGCAACG GACACAGCAA GCCGAAAGCC AAAAAATCTG GCGGCAAACG TGTCGTTGTT
CTCGATCCAG GTCACGGCGG AATTGATACC GGAGCGATCG GACGCAACGG TTCGAAAGAA
AAACATGTGG TGCTGGCGAT TGCTAAAAAC GTCCGTTCCA TTTTGCGTAA TCATGGGATT
GATGCGCGTT TAACGCGTTC TGGCGATACG TTTATCCCAC TTTACGATCG CGTTGAAATC
GCCCATAAAC ATGGCGCAGA TCTGTTTATG TCAATTCATG CCGATGGCTT TACCAACCCG
AAAGCTGCCG GTGCTTCGGT ATTTGCCCTC TCTAACCGTG GGGCAAGTAG CGCAATGGCG
AAATACCTGT CTGAACGCGA AAACCGCGCC GATGAAGTTG CCGGTAAAAA GGCGACTGAC
AAGGATCACC TATTGCAACA AGTGCTGTTT GATCTGGTGC AAACAGATAC CATTAAAAAT
AGTCTGACGC TCGGCTCGCA TATTCTGAAG AAGATTAAGC CGGTGCATAA ACTGCACAGC
CGCAACACCG AACAAGCGGC ATTTGTGGTG TTGAAATCAC CGTCGGTTCC TTCGGTGCTG
GTGGAAACCT CGTTTATCAC CAACCCGGAA GAAGAACGGC TGTTAGGCAC GGCGGCGTTT
CGTCAGAAAA TCGCCACAGC GATTGCTGAA GGCGTGATCA GTTATTTCCA CTGGTTCGAC
AACCAGAAAG CACATTCGAA AAAGCGATAA
 
Protein sequence
MSTFKPLKTL TSRRQVLKAG LAALTLSGMS QAIAKDELLK TSNGHSKPKA KKSGGKRVVV 
LDPGHGGIDT GAIGRNGSKE KHVVLAIAKN VRSILRNHGI DARLTRSGDT FIPLYDRVEI
AHKHGADLFM SIHADGFTNP KAAGASVFAL SNRGASSAMA KYLSERENRA DEVAGKKATD
KDHLLQQVLF DLVQTDTIKN SLTLGSHILK KIKPVHKLHS RNTEQAAFVV LKSPSVPSVL
VETSFITNPE EERLLGTAAF RQKIATAIAE GVISYFHWFD NQKAHSKKR