Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1099 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1176638 |
End bp | 1178437 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | GTP-binding protein LepA |
Protein accession | ACX38773 |
Protein GI | 260448351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000732833 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TACGTAACTT TTCGATCATA GCTCACATTG ACCACGGTAA ATCGACGCTG TCTGACCGTA TTATCCAGAT CTGCGGTGGC CTGTCTGACC GTGAAATGGA GGCGCAGGTT CTCGATTCCA TGGATCTTGA GCGTGAGCGT GGCATTACCA TCAAAGCGCA AAGCGTGACG CTGGACTACA AAGCGTCTGA CGGCGAAACC TATCAGCTTA ACTTTATCGA CACCCCGGGC CACGTAGACT TCTCCTATGA AGTTTCCCGT TCGCTGGCTG CCTGTGAAGG TGCATTGCTG GTGGTCGACG CCGGGCAGGG CGTAGAAGCG CAAACCCTGG CAAACTGCTA CACCGCCATG GAAATGGATC TCGAAGTTGT GCCGGTACTG AACAAGATTG ACCTGCCGGC AGCCGATCCT GAACGCGTGG CGGAAGAAAT TGAAGATATC GTCGGCATCG ACGCCACCGA CGCGGTGCGC TGTTCAGCGA AAACCGGCGT TGGTGTGCAG GACGTTCTCG AACGTCTGGT GCGCGACATT CCGCCGCCGG AAGGCGATCC GGAAGGCCCG TTGCAGGCAC TAATTATCGA CTCATGGTTC GACAACTACC TGGGCGTTGT TTCACTTATC CGTATTAAAA ACGGCACCCT GCGTAAGGGC GACAAAGTGA AAGTCATGAG TACCGGGCAG ACCTATAACG CCGACCGTCT GGGCATCTTC ACGCCGAAAC AGGTTGACCG CACTGAACTG AAATGTGGCG AAGTAGGCTG GCTCGTATGT GCGATTAAAG ATATCCACGG CGCTCCAGTC GGCGATACCT TAACGCTGGC GCGTAATCCG GCAGAAAAGG CGCTGCCTGG CTTTAAGAAA GTCAAACCGC AGGTATACGC CGGTCTGTTC CCGGTAAGTT CCGACGACTA TGAAGCCTTC CGTGACGCGC TGGGTAAACT CAGCCTGAAC GATGCCTCAC TGTTCTATGA GCCGGAAAGC TCCAGCGCGC TGGGCTTTGG TTTCCGCTGC GGCTTCCTCG GCCTGCTGCA CATGGAGATC ATCCAGGAAC GTCTGGAACG TGAATACGAT CTGGATCTGA TCACCACTGC GCCGACCGTA GTGTATGAAG TTGAAACCAC GTCAAGAGAA GTTATCTACG TCGACAGCCC ATCCAAGCTG CCTGCGGTAA ATAACATCTA CGAACTGCGC GAGCCGATTG CAGAGTGTCA CATGCTGCTG CCGCAGGCAT ATCTCGGCAA CGTTATTACG TTGTGCGTAG AAAAACGCGG CGTGCAGACC AATATGGTTT ACCACGGTAA TCAGGTGGCG CTGACGTACG AGATCCCGAT GGCGGAAGTG GTGCTCGACT TCTTCGATCG CCTGAAATCT ACCTCGCGTG GTTATGCGTC TCTGGATTAC AACTTCAAGC GCTTCCAGGC GTCCGACATG GTACGTGTAG ACGTATTAAT CAACGGTGAA CGTGTTGATG CGCTGGCGTT GATCACCCAC CGTGATAATT CGCAAAACCG CGGTCGCGAG TTGGTGGAGA AGATGAAAGA TCTGATCCCA CGCCAGCAGT TTGATATCGC CATTCAGGCA GCGATTGGTA CGCACATCAT TGCGCGATCC ACCGTGAAAC AGCTGCGTAA AAACGTACTG GCTAAATGTT ATGGCGGCGA TATCAGCCGT AAGAAAAAGC TGCTGCAGAA GCAGAAAGAA GGTAAGAAAC GCATGAAGCA GATCGGTAAC GTCGAGCTGC CGCAGGAAGC GTTCCTCGCC ATTCTGCACG TCGGCAAAGA CAACAAATAA
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Protein sequence | MKNIRNFSII AHIDHGKSTL SDRIIQICGG LSDREMEAQV LDSMDLERER GITIKAQSVT LDYKASDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM EMDLEVVPVL NKIDLPAADP ERVAEEIEDI VGIDATDAVR CSAKTGVGVQ DVLERLVRDI PPPEGDPEGP LQALIIDSWF DNYLGVVSLI RIKNGTLRKG DKVKVMSTGQ TYNADRLGIF TPKQVDRTEL KCGEVGWLVC AIKDIHGAPV GDTLTLARNP AEKALPGFKK VKPQVYAGLF PVSSDDYEAF RDALGKLSLN DASLFYEPES SSALGFGFRC GFLGLLHMEI IQERLEREYD LDLITTAPTV VYEVETTSRE VIYVDSPSKL PAVNNIYELR EPIAECHMLL PQAYLGNVIT LCVEKRGVQT NMVYHGNQVA LTYEIPMAEV VLDFFDRLKS TSRGYASLDY NFKRFQASDM VRVDVLINGE RVDALALITH RDNSQNRGRE LVEKMKDLIP RQQFDIAIQA AIGTHIIARS TVKQLRKNVL AKCYGGDISR KKKLLQKQKE GKKRMKQIGN VELPQEAFLA ILHVGKDNK
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