Gene EcDH1_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1099 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1176638 
End bp1178437 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content54% 
IMG OID 
ProductGTP-binding protein LepA 
Protein accessionACX38773 
Protein GI260448351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000732833 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA TACGTAACTT TTCGATCATA GCTCACATTG ACCACGGTAA ATCGACGCTG 
TCTGACCGTA TTATCCAGAT CTGCGGTGGC CTGTCTGACC GTGAAATGGA GGCGCAGGTT
CTCGATTCCA TGGATCTTGA GCGTGAGCGT GGCATTACCA TCAAAGCGCA AAGCGTGACG
CTGGACTACA AAGCGTCTGA CGGCGAAACC TATCAGCTTA ACTTTATCGA CACCCCGGGC
CACGTAGACT TCTCCTATGA AGTTTCCCGT TCGCTGGCTG CCTGTGAAGG TGCATTGCTG
GTGGTCGACG CCGGGCAGGG CGTAGAAGCG CAAACCCTGG CAAACTGCTA CACCGCCATG
GAAATGGATC TCGAAGTTGT GCCGGTACTG AACAAGATTG ACCTGCCGGC AGCCGATCCT
GAACGCGTGG CGGAAGAAAT TGAAGATATC GTCGGCATCG ACGCCACCGA CGCGGTGCGC
TGTTCAGCGA AAACCGGCGT TGGTGTGCAG GACGTTCTCG AACGTCTGGT GCGCGACATT
CCGCCGCCGG AAGGCGATCC GGAAGGCCCG TTGCAGGCAC TAATTATCGA CTCATGGTTC
GACAACTACC TGGGCGTTGT TTCACTTATC CGTATTAAAA ACGGCACCCT GCGTAAGGGC
GACAAAGTGA AAGTCATGAG TACCGGGCAG ACCTATAACG CCGACCGTCT GGGCATCTTC
ACGCCGAAAC AGGTTGACCG CACTGAACTG AAATGTGGCG AAGTAGGCTG GCTCGTATGT
GCGATTAAAG ATATCCACGG CGCTCCAGTC GGCGATACCT TAACGCTGGC GCGTAATCCG
GCAGAAAAGG CGCTGCCTGG CTTTAAGAAA GTCAAACCGC AGGTATACGC CGGTCTGTTC
CCGGTAAGTT CCGACGACTA TGAAGCCTTC CGTGACGCGC TGGGTAAACT CAGCCTGAAC
GATGCCTCAC TGTTCTATGA GCCGGAAAGC TCCAGCGCGC TGGGCTTTGG TTTCCGCTGC
GGCTTCCTCG GCCTGCTGCA CATGGAGATC ATCCAGGAAC GTCTGGAACG TGAATACGAT
CTGGATCTGA TCACCACTGC GCCGACCGTA GTGTATGAAG TTGAAACCAC GTCAAGAGAA
GTTATCTACG TCGACAGCCC ATCCAAGCTG CCTGCGGTAA ATAACATCTA CGAACTGCGC
GAGCCGATTG CAGAGTGTCA CATGCTGCTG CCGCAGGCAT ATCTCGGCAA CGTTATTACG
TTGTGCGTAG AAAAACGCGG CGTGCAGACC AATATGGTTT ACCACGGTAA TCAGGTGGCG
CTGACGTACG AGATCCCGAT GGCGGAAGTG GTGCTCGACT TCTTCGATCG CCTGAAATCT
ACCTCGCGTG GTTATGCGTC TCTGGATTAC AACTTCAAGC GCTTCCAGGC GTCCGACATG
GTACGTGTAG ACGTATTAAT CAACGGTGAA CGTGTTGATG CGCTGGCGTT GATCACCCAC
CGTGATAATT CGCAAAACCG CGGTCGCGAG TTGGTGGAGA AGATGAAAGA TCTGATCCCA
CGCCAGCAGT TTGATATCGC CATTCAGGCA GCGATTGGTA CGCACATCAT TGCGCGATCC
ACCGTGAAAC AGCTGCGTAA AAACGTACTG GCTAAATGTT ATGGCGGCGA TATCAGCCGT
AAGAAAAAGC TGCTGCAGAA GCAGAAAGAA GGTAAGAAAC GCATGAAGCA GATCGGTAAC
GTCGAGCTGC CGCAGGAAGC GTTCCTCGCC ATTCTGCACG TCGGCAAAGA CAACAAATAA
 
Protein sequence
MKNIRNFSII AHIDHGKSTL SDRIIQICGG LSDREMEAQV LDSMDLERER GITIKAQSVT 
LDYKASDGET YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAM
EMDLEVVPVL NKIDLPAADP ERVAEEIEDI VGIDATDAVR CSAKTGVGVQ DVLERLVRDI
PPPEGDPEGP LQALIIDSWF DNYLGVVSLI RIKNGTLRKG DKVKVMSTGQ TYNADRLGIF
TPKQVDRTEL KCGEVGWLVC AIKDIHGAPV GDTLTLARNP AEKALPGFKK VKPQVYAGLF
PVSSDDYEAF RDALGKLSLN DASLFYEPES SSALGFGFRC GFLGLLHMEI IQERLEREYD
LDLITTAPTV VYEVETTSRE VIYVDSPSKL PAVNNIYELR EPIAECHMLL PQAYLGNVIT
LCVEKRGVQT NMVYHGNQVA LTYEIPMAEV VLDFFDRLKS TSRGYASLDY NFKRFQASDM
VRVDVLINGE RVDALALITH RDNSQNRGRE LVEKMKDLIP RQQFDIAIQA AIGTHIIARS
TVKQLRKNVL AKCYGGDISR KKKLLQKQKE GKKRMKQIGN VELPQEAFLA ILHVGKDNK