Gene EcDH1_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1077 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1146879 
End bp1147616 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID 
Productouter membrane assembly lipoprotein YfiO 
Protein accessionACX38751 
Protein GI260448329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0504949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA TGAAATATCT GGTGGCAGCC GCCACACTAA GCCTGTTTTT GGCGGGTTGC 
TCGGGGTCAA AGGAAGAAGT ACCTGATAAT CCGCCAAATG AAATTTACGC GACTGCACAA
CAAAAGCTGC AGGACGGTAA CTGGAGACAG GCAATAACGC AACTGGAAGC GTTAGATAAT
CGCTATCCGT TTGGTCCGTA TTCGCAGCAG GTGCAGCTGG ATCTCATCTA CGCCTACTAT
AAAAACGCCG ATTTGCCGTT AGCACAGGCT GCCATCGATC GTTTTATTCG CCTTAACCCG
ACCCATCCGA ATATCGATTA TGTCATGTAC ATGCGTGGCC TGACCAATAT GGCGCTGGAT
GACAGTGCGC TGCAAGGGTT CTTTGGCGTC GATCGTAGCG ATCGCGATCC TCAACATGCA
CGAGCTGCGT TTAGTGACTT TTCCAAACTG GTGCGCGGCT ATCCGAACAG TCAGTACACC
ACCGATGCCA CCAAACGTCT GGTATTCCTG AAAGATCGTC TGGCGAAATA TGAATACTCC
GTGGCCGAGT ACTATACAGA ACGTGGCGCA TGGGTTGCCG TCGTTAACCG CGTAGAAGGC
ATGTTGCGCG ACTACCCGGA TACCCAGGCT ACGCGTGATG CGCTGCCGCT GATGGAAAAT
GCATACCGTC AGATGCAGAT GAATGCGCAA GCTGAAAAAG TAGCGAAAAT CATCGCCGCA
AACAGCAGCA ATACATAA
 
Protein sequence
MTRMKYLVAA ATLSLFLAGC SGSKEEVPDN PPNEIYATAQ QKLQDGNWRQ AITQLEALDN 
RYPFGPYSQQ VQLDLIYAYY KNADLPLAQA AIDRFIRLNP THPNIDYVMY MRGLTNMALD
DSALQGFFGV DRSDRDPQHA RAAFSDFSKL VRGYPNSQYT TDATKRLVFL KDRLAKYEYS
VAEYYTERGA WVAVVNRVEG MLRDYPDTQA TRDALPLMEN AYRQMQMNAQ AEKVAKIIAA
NSSNT