| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1062 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1133702 |
|---|
| End bp | 1134943 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF21 |
|---|
| Protein accession | ACX38736 |
|---|
| Protein GI | 260448314 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000790091 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGTCA TTTCAGCCTA TTTTTCCGGG TCCGAAACCG GAATGATGAC CCTCAACCGC
TATCGTCTGC GACATATGGC GAAACAGGGT AATCGCTCGG CCAAACGCGT CGAAAAATTG
CTGCGTAAGC CAGACCGCCT GATAAGCCTG GTGTTAATCG GCAATAACCT GGTCAATATT
CTTGCCTCCG CGCTCGGCAC TATTGTTGGG ATGCGTTTGT ACGGCGATGC GGGCGTGGCA
ATTGCGACTG GTGTGCTGAC TTTTGTCGTA CTGGTATTTG CTGAGGTATT GCCGAAAACC
ATTGCCGCGC TGTACCCGGA AAAAGTCGCT TATCCGAGTA GTTTTCTGCT GGCTCCGCTG
CAAATTTTGA TGATGCCGCT GGTCTGGTTG CTGAATGCTA TCACCCGTAT GCTGATGCGC
ATGATGGGTA TCAAAACCGA TATCGTGGTT AGCGGCTCTT TGAGCAAAGA AGAGTTGCGC
ACTATCGTGC ACGAATCACG CTCACAAATT TCCCGTCGCA ATCAGGATAT GCTGCTGTCG
GTGCTCGATC TGGAAAAAAT GACCGTTGAT GACATCATGG TGCCGCGCAG TGAAATTATC
GGTATTGATA TCAACGATGA CTGGAAATCG ATTCTGCGCC AACTCTCCCA CTCACCTCAC
GGGCGCATCG TGCTCTACCG TGATTCGCTG GACGACGCCA TCAGTATGCT GCGAGTACGT
GAAGCCTGGC GGTTGATGTC GGAGAAAAAA GAGTTCACCA AAGAAACCAT GCTGCGCGCC
GCGGACGAGA TCTATTTTGT GCCGGAAGGT ACGCCGCTCA GCACGCAGTT GGTAAAGTTT
CAGCGCAACA AAAAGAAAGT CGGCCTGGTC GTCAACGAGT ATGGAGACAT TCAGGGGCTG
GTGACGGTTG AAGATATTCT GGAAGAGATT GTCGGCGATT TCACTACGTC GATGTCGCCA
ACACTTGCCG AAGAGGTCAC GCCGCAAAAC GACGGTTCGG TGATTATCGA TGGCACCGCC
AACGTGCGGG AAATCAACAA AGCCTTTAAC TGGCATCTAC CGGAAGATGA TGCCCGCACG
GTTAATGGCG TCATTCTTGA GGCACTGGAA GAGATCCCTG TCGCAGGCAC CCGCGTGCGT
ATTGGCGAGT ACGATATCGA TATTCTCGAC GTACAGGACA ATATGATTAA GCAGGTAAAA
GTTTTTCCTG TGAAACCGCT GCGCGAGAGT GTGGCGGAGT AA
|
|---|
| Protein sequence | MVVISAYFSG SETGMMTLNR YRLRHMAKQG NRSAKRVEKL LRKPDRLISL VLIGNNLVNI
LASALGTIVG MRLYGDAGVA IATGVLTFVV LVFAEVLPKT IAALYPEKVA YPSSFLLAPL
QILMMPLVWL LNAITRMLMR MMGIKTDIVV SGSLSKEELR TIVHESRSQI SRRNQDMLLS
VLDLEKMTVD DIMVPRSEII GIDINDDWKS ILRQLSHSPH GRIVLYRDSL DDAISMLRVR
EAWRLMSEKK EFTKETMLRA ADEIYFVPEG TPLSTQLVKF QRNKKKVGLV VNEYGDIQGL
VTVEDILEEI VGDFTTSMSP TLAEEVTPQN DGSVIIDGTA NVREINKAFN WHLPEDDART
VNGVILEALE EIPVAGTRVR IGEYDIDILD VQDNMIKQVK VFPVKPLRES VAE
|
|---|
| |