Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1028 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 1101036 |
End bp | 1105616 |
Gene Length | 4581 bp |
Protein Length | 1526 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | outer membrane autotransporter barrel domain protein |
Protein accession | ACX38706 |
Protein GI | 260448284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGGA CCAGTCCCTA TTATTGTCGC CGCTCAGTAC TTTCCTTATT GATATCTGCC TTGATATATG CCCCGCCCGG GATGGCTGCC TTCACTACTA ATGTTATTGG TGTGGTAAAC GATGAGACTG TAGATGGCAA CCAAAAAGTG GATGAACGAG GTACAACAAA TAACACTCAT ATTATCAACC ATGGCCAGCA GAATGTTCAT GGCGGGGTAT CTAATGGAAG TCTTATTGAA TCTGGTGGAT ATCAAGATAT AGGAAGTCAT AACAATTTTG TGGGGCAGGC TAATAATACA ACCATTAACG GTGGCAGACA GTCAATTCAT GACGGGGGTA TTTCCACAGG TACGACAATC GAGAGTGGCA ATCAGGACGT TTATAAAGGG GGTATCAGCA ATGGAACGAC AATTAAGGGC GGTGCTTCAC GCGTAGAGGG AGGGAGTGCG AATGGAATAC TCATTGATGG TGGTAGCCAG ATAGTAAAAG TTCAAGGGCA TGCTGATGGT ACAACGATAA ATAAGTCTGG CTCTCAGGAC GTAGTACAAG GAAGTCTGGC AACGAACACA ACCATAAATG GTGGTCGACA GTATGTTGAA CAGAGCACAG TAGAAACAAC AACCATTAAA AATGGCGGTG AGCAAAGAGT ATATGAGAGC CGTGCGCTGG ACACGACGAT TGAAGGCGGA ACTCAGTCTC TGAATAGTAA GTCAACGGCA AAAAATACGC ATATCTATTC TGGTGGCACG CAAATTGTTG ATAACACCAG CACCTCGGAT GTTATTGAAG TTTATTCTGG TGGCGTGCTT GATGTTAGGG GTGGTACGGC AACAAATGTT ACCCAGCACG ATGGTGCAAT TTTAAAAACT AACACTAACG GTACGACGGT GAGCGGTACG AATAGTGAAG GTGCATTCTC CATCCACAAT CACGTGGCAG ACAATGTGTT GCTGGAAAAC GGTGGTCATT TAGACATAAA CGCATATGGT TCGGCAAACA AGACGATTAT TAAAGATAAA GGAACAATGT CAGTTTTAAC CAATGCTAAA GCTGATGCGA CCCGAATAGA TAATGGCGGG GTTATGGATG TTGCAGGAAA CGCGACAAAT ACCATAATTA ATGGTGGCAC ACAGAATATT AATAATTATG GCATAGCCAC AGGCACCAAT ATCAACAGCG GAACGCAAAA TATCAAAAGC GGCGGGAAAG CTGACACAAC AATTATATCC TCCGGGAGCC GGCAGGTTGT TGAGAAAGAT GGTACGGCAA TTGGCAGCAA TATTAGCGCC GGAGGCTCGC TGATTGTCTA TACCGGCGGT ATTGCACATG GGGTTAACCA GGAGACGGGC AGTGCTTTAG TTGCCAACAC GGGTGCAGGG ACTGATATCG AAGGATACAA CAAGCTCTCT CACTTCACTA TTACCGGAGG GGAGGCTAAT TATGTTGTGC TGGAAAATAC CGGCGAACTG ACGGTAGTGG CTAAAACCTC GGCGAAAAAT ACTACCATTG ATACTGGCGG TAAGCTGATT GTCCAGAAGG AGGCTAAAAC AGATAGCACC AGACTTAATA ATGGCGGCGT TCTGGAGGTT CAGGACGGTG GTGAGGCTAA GCATGTTGAG CAACAATCCG GCGGCGCATT AATTGCTTCC ACGACCTCCG GAACACTTAT CGAAGGAACC AACAGTTATG GTGATGCTTT CTACATCAGG AATTCAGAAG CTAAAAATGT AGTGCTGGAA AACGCTGGCT CATTAACAGT CGTCACTGGT TCCCGCGCAG TTGACACGAT TATTAATGCC AACGGCAAAA TGGATGTTTA TGGAAAAGAT GTTGGCACTG TACTCAATAG TGCTGGCACC CAAACAATAT ATGCCAGTGC CACTTCTGAT AAAGCAAATA TCAAAGGTGG CAAGCAAACG GTATATGGTT TAGCCACTGA AGCAAATATC GAAAGTGGTG AACAAATTGT TGATGGTGGG TCAACAGAGA AAACACACAT CAATGGTGGC ACGCAAACCG TTCAGAATTA TGGTAAGGCA ATCAATACCG ATATCGTCTC TGGCCTACAA CAAATTATGG CAAACGGGAC AGCGGAAGGT TCCATTATTA ATGGGGGTTC ACAGGTAGTT AATGAGGGCG GCCTGGCTGA AAACTCGGTG CTTAATGACG GCGGCACACT CGATGTGCGG GAGAAAGGCA GCGCAACGGG GATACAGCAG AGTAGCCAGG GCGCTTTGGT TGCAACCACC AGGGCGACGC GGGTCACAGG AACACGCGCG GATGGCGTCG CGTTCAGCAT CGAGCAGGGT GCGGCGAACA ATATCCTGCT GGCAAATGGC GGCGTGTTAA CCGTGGAGTC AGACACCTCT TCTGACAAAA CACAGGTCAA TATGGGCGGA CGGGAGATCG TCAAAACAAA AGCCACTGCG ACAGGCACGA CGCTCACCGG CGGTGAACAA ATTGTCGAGG GTGTGGCGAA TGAGACAACA ATTAACGACG GCGGAATACA AACAGTTTCA GCTAACGGAG AGGCAATAAA AACAAAGATC AATGAAGGCG GTACGCTGAC AGTCAACGAT AATGGCAAAG CGACAGATAT CGTCCAGAAC AGCGGTGCCG CTCTCCAGAC GAGCACGGCT AACGGTATTG AAATCAGCGG TACTCACCAG TACGGTACTT TTTCCATTTC CGGCAATTTA GCGACCAATA TGTTGCTGGA AAATGGCGGT AATTTATTGG TATTAGCAGG TACCGAAGCT CGCGACTCCA CGGTTGGCAA GGGTGGGGCA ATGCAAAACC TGGGTCAGGA CTCCGCCACA AAGGTTAACT CTGGCGGGCA ATATACCCTT GGGCGGTCAA AAGATGAGTT TCAGGCTCTG GCCCGGGCAG AAGATCTCCA GGTCGCTGGC GGTACGGCAA TCGTCTACGC AGGTACGCTG GCGGATGCAT CGGTCAGTGG CGCGACAGGA AGCCTGTCGT TAATGACGCC ACGGGATAAT GTTACGCCAG TTAAACTCGA AGGGGCGGTC CGGATTACCG ATAGCGCGAC ATTGACTCTG GGAAATGGCG TCGATACCAC GCTTGCCGAC CTGACGGCTG CCAGCCGGGG CAGTGTCTGG CTTAACAGCA ATAATTCCTG TGCAGGTACC AGCAACTGCG AATATAGAGT AAACAGTTTG CTACTCAACG ACGGTGATGT TTATTTGTCA GCACAAACAG CAGCGCCTGC CACAACTAAC GGTATCTACA ATACGCTGAC AACCAATGAA CTTTCCGGTA GCGGTAATTT CTACCTGCAT ACCAACGTTG CAGGCTCCCG GGGCGATCAA CTGGTCGTCA ACAACAACGC CACTGGTAAT TTTAAAATCT TTGTTCAGGA TACCGGCGTC AGCCCACAGT CTGACGACGC GATGACGCTG GTGAAAACAG GGGGAGGGGA TGCTTCGTTT ACGCTGGGCA ATACCGGCGG TTTCGTTGAT CTTGGGACCT ATGAGTATGT CCTGAAAAGT GACGGCAACA GCAACTGGAA CCTGACCAAT GATGTCAAAC CCAACCCGGA CCCCATCCCA AATCCAAAGC CAGACCCAAA ACCCGATCCA AAGCCAGACC CAAATCCAAA ACCAGACCCT ACTCCCGATC CAACGCCGAC ACCCGTTCCG GAGAAACGCA TTACGCCTTC TACGGCAGCC GTACTCAATA TGGCAGCAAC ATTACCGTTG GTATTTGATG CTGAGCTAAA CAGTATTCGC GAGCGGTTGA ACATAATGAA AGCGAGTCCA CACAACAATA ATGTCTGGGG GGCGACGTAT AACACCCGTA ATAATGTCAC CACCGATGCG GGTGCCGGGT TTGAGCAGAC GCTGACCGGA ATGACAGTGG GGATCGACAG CCGTAATGAT ATTCCTGAAG GAATTACCAC GCTAGGCGCT TTTATGGGCT ATTCCCATTC ACATATCGGT TTTGATCGCG GAGGACATGG CAGTGTGGGC AGTTATTCTC TGGGCGGCTA TGCCAGTTGG GAACATGAAA GTGGTTTCTA TCTGGACGGT GTCGTGAAGC TGAACCGTTT TAAAAGTAAC GTAGCAGGTA AAATGAGCAG CGGTGGAGCC GCCAATGGCA GTTACCACAG CAACGGGCTG GGCGGTCACA TTGAAACCGG GATGCGATTT ACCGATGGTA ACTGGAACCT GACGCCGTAT GCATCGTTAA CGGGGTTCAC CGCTGATAAC CCCGAATATC ATTTATCCAA TGGCATGAAA TCGAAATCAG TCGATACCCG CAGTATATAT CGTGAACTGG GCGCAACGCT GAGTTACAAC ATGCGTCTGG GGAACGGTAT GGAAGTTGAG CCGTGGCTGA AGGCGGCTGT GCGCAAAGAA TTTGTCGATG ATAACCGGGT GAAAGTGAAT AGTGACGGTA ATTTCGTCAA TTATTTGTCG GGCAGACGTG GAATATACCA GGCAGGTATT AAAGCCTCAT TCAGCAGTAC GTTAAGCGGG CATCTTGGGG TGGGGTATAG CCATAGTGCC GGTGTGGAAT CCCCGTGGAA CGCGGTAGCT GGTGTGAACT GGTCGTTCTG A
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Protein sequence | MNRTSPYYCR RSVLSLLISA LIYAPPGMAA FTTNVIGVVN DETVDGNQKV DERGTTNNTH IINHGQQNVH GGVSNGSLIE SGGYQDIGSH NNFVGQANNT TINGGRQSIH DGGISTGTTI ESGNQDVYKG GISNGTTIKG GASRVEGGSA NGILIDGGSQ IVKVQGHADG TTINKSGSQD VVQGSLATNT TINGGRQYVE QSTVETTTIK NGGEQRVYES RALDTTIEGG TQSLNSKSTA KNTHIYSGGT QIVDNTSTSD VIEVYSGGVL DVRGGTATNV TQHDGAILKT NTNGTTVSGT NSEGAFSIHN HVADNVLLEN GGHLDINAYG SANKTIIKDK GTMSVLTNAK ADATRIDNGG VMDVAGNATN TIINGGTQNI NNYGIATGTN INSGTQNIKS GGKADTTIIS SGSRQVVEKD GTAIGSNISA GGSLIVYTGG IAHGVNQETG SALVANTGAG TDIEGYNKLS HFTITGGEAN YVVLENTGEL TVVAKTSAKN TTIDTGGKLI VQKEAKTDST RLNNGGVLEV QDGGEAKHVE QQSGGALIAS TTSGTLIEGT NSYGDAFYIR NSEAKNVVLE NAGSLTVVTG SRAVDTIINA NGKMDVYGKD VGTVLNSAGT QTIYASATSD KANIKGGKQT VYGLATEANI ESGEQIVDGG STEKTHINGG TQTVQNYGKA INTDIVSGLQ QIMANGTAEG SIINGGSQVV NEGGLAENSV LNDGGTLDVR EKGSATGIQQ SSQGALVATT RATRVTGTRA DGVAFSIEQG AANNILLANG GVLTVESDTS SDKTQVNMGG REIVKTKATA TGTTLTGGEQ IVEGVANETT INDGGIQTVS ANGEAIKTKI NEGGTLTVND NGKATDIVQN SGAALQTSTA NGIEISGTHQ YGTFSISGNL ATNMLLENGG NLLVLAGTEA RDSTVGKGGA MQNLGQDSAT KVNSGGQYTL GRSKDEFQAL ARAEDLQVAG GTAIVYAGTL ADASVSGATG SLSLMTPRDN VTPVKLEGAV RITDSATLTL GNGVDTTLAD LTAASRGSVW LNSNNSCAGT SNCEYRVNSL LLNDGDVYLS AQTAAPATTN GIYNTLTTNE LSGSGNFYLH TNVAGSRGDQ LVVNNNATGN FKIFVQDTGV SPQSDDAMTL VKTGGGDASF TLGNTGGFVD LGTYEYVLKS DGNSNWNLTN DVKPNPDPIP NPKPDPKPDP KPDPNPKPDP TPDPTPTPVP EKRITPSTAA VLNMAATLPL VFDAELNSIR ERLNIMKASP HNNNVWGATY NTRNNVTTDA GAGFEQTLTG MTVGIDSRND IPEGITTLGA FMGYSHSHIG FDRGGHGSVG SYSLGGYASW EHESGFYLDG VVKLNRFKSN VAGKMSSGGA ANGSYHSNGL GGHIETGMRF TDGNWNLTPY ASLTGFTADN PEYHLSNGMK SKSVDTRSIY RELGATLSYN MRLGNGMEVE PWLKAAVRKE FVDDNRVKVN SDGNFVNYLS GRRGIYQAGI KASFSSTLSG HLGVGYSHSA GVESPWNAVA GVNWSF
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