Gene EcDH1_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1022 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1091041 
End bp1092489 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content58% 
IMG OID 
Productsuccinic semialdehyde dehydrogenase 
Protein accessionACX38703 
Protein GI260448281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTA ACGACAGTAA CTTATTCCGC CAGCAGGCGT TGATTAACGG GGAATGGCTG 
GACGCCAACA ATGGTGAAGC CATCGACGTC ACCAATCCGG CGAACGGCGA CAAGCTGGGT
AGCGTGCCGA AAATGGGCGC GGATGAAACC CGCGCCGCTA TCGACGCCGC CAACCGCGCC
CTGCCCGCCT GGCGCGCGCT CACCGCCAAA GAACGCGCCA CCATTCTGCG CAACTGGTTC
AATTTGATGA TGGAGCATCA GGACGATTTA GCGCGCCTGA TGACCCTCGA ACAGGGTAAA
CCACTGGCCG AAGCGAAAGG CGAAATCAGC TACGCCGCCT CCTTTATTGA GTGGTTTGCC
GAAGAAGGCA AACGCATTTA TGGCGACACC ATTCCTGGTC ATCAGGCCGA TAAACGCCTG
ATTGTTATCA AGCAGCCGAT TGGCGTCACC GCGGCTATCA CGCCGTGGAA CTTCCCGGCG
GCGATGATTA CCCGCAAAGC CGGTCCGGCG CTGGCAGCAG GCTGCACCAT GGTGCTGAAG
CCCGCCAGTC AGACGCCGTT CTCTGCGCTG GCGCTGGCGG AGCTGGCGAT CCGCGCGGGC
GTTCCGGCTG GGGTATTTAA CGTGGTCACC GGTTCGGCGG GCGCGGTCGG TAACGAACTG
ACCAGTAACC CGCTGGTGCG CAAACTGTCG TTTACCGGTT CGACCGAAAT TGGCCGCCAG
TTAATGGAAC AGTGCGCGAA AGACATCAAG AAAGTGTCGC TGGAGCTGGG CGGTAACGCG
CCGTTTATCG TCTTTGACGA TGCCGACCTC GACAAAGCCG TGGAAGGCGC GCTGGCCTCG
AAATTCCGCA ACGCCGGGCA AACCTGCGTC TGCGCCAACC GCCTGTATGT GCAGGACGGC
GTGTATGACC GTTTTGCCGA AAAATTGCAG CAGGCAGTGA GCAAACTGCA CATCGGCGAC
GGGCTGGATA ACGGCGTCAC CATCGGGCCG CTGATCGATG AAAAAGCGGT AGCAAAAGTG
GAAGAGCATA TTGCCGATGC GCTGGAGAAA GGCGCGCGCG TGGTTTGCGG CGGTAAAGCG
CACGAACGCG GCGGCAACTT CTTCCAGCCG ACCATTCTGG TGGACGTTCC GGCCAACGCC
AAAGTGTCGA AAGAAGAGAC GTTCGGCCCC CTCGCCCCGC TGTTCCGCTT TAAAGATGAA
GCTGATGTGA TTGCGCAAGC CAATGACACC GAGTTTGGCC TTGCCGCCTA TTTCTACGCC
CGTGATTTAA GCCGCGTCTT CCGCGTGGGC GAAGCGCTGG AGTACGGCAT CGTCGGCATC
AATACCGGCA TTATTTCCAA TGAAGTGGCC CCGTTCGGCG GCATCAAAGC CTCGGGTCTG
GGTCGTGAAG GTTCGAAGTA TGGCATCGAA GATTACTTAG AAATCAAATA TATGTGCATC
GGTCTTTAA
 
Protein sequence
MKLNDSNLFR QQALINGEWL DANNGEAIDV TNPANGDKLG SVPKMGADET RAAIDAANRA 
LPAWRALTAK ERATILRNWF NLMMEHQDDL ARLMTLEQGK PLAEAKGEIS YAASFIEWFA
EEGKRIYGDT IPGHQADKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAL ALAELAIRAG VPAGVFNVVT GSAGAVGNEL TSNPLVRKLS FTGSTEIGRQ
LMEQCAKDIK KVSLELGGNA PFIVFDDADL DKAVEGALAS KFRNAGQTCV CANRLYVQDG
VYDRFAEKLQ QAVSKLHIGD GLDNGVTIGP LIDEKAVAKV EEHIADALEK GARVVCGGKA
HERGGNFFQP TILVDVPANA KVSKEETFGP LAPLFRFKDE ADVIAQANDT EFGLAAYFYA
RDLSRVFRVG EALEYGIVGI NTGIISNEVA PFGGIKASGL GREGSKYGIE DYLEIKYMCI
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