| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1021 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1089747 |
|---|
| End bp | 1091027 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | ACX38702 |
|---|
| Protein GI | 260448280 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA ATAAAGAGTT AATGCAGCGC CGCAGTCAGG CGATTCCCCG TGGCGTTGGG
CAAATTCACC CGATTTTCGC TGACCGCGCG GAAAACTGCC GGGTGTGGGA CGTTGAAGGC
CGTGAGTATC TTGATTTCGC GGGCGGGATT GCGGTGCTCA ATACCGGGCA CCTGCATCCG
AAGGTGGTGG CCGCGGTGGA AGCGCAGTTG AAAAAACTGT CGCACACCTG CTTCCAGGTG
CTGGCTTACG AGCCGTATCT GGAGCTGTGC GAGATTATGA ATCAGAAGGT GCCGGGCGAT
TTCGCCAAGA AAACGCTGCT GGTTACGACC GGTTCCGAAG CGGTGGAAAA CGCGGTAAAA
ATCGCCCGCG CCGCCACCAA ACGTAGCGGC ACCATCGCTT TTAGCGGCGC GTATCACGGG
CGCACGCATT ACACGCTGGC GCTGACCGGC AAGGTGAATC CGTACTCTGC GGGCATGGGG
CTGATGCCGG GTCATGTTTA TCGCGCGCTT TATCCTTGCC CGCTGCACGG CATAAGCGAG
GATGACGCTA TCGCCAGCAT CCACCGGATC TTCAAAAATG ATGCCGCGCC GGAAGATATC
GCCGCCATCG TGATTGAGCC GGTTCAGGGC GAAGGCGGTT TCTACGCCTC GTCGCCAGCC
TTTATGCAGC GTTTACGCGC TCTGTGTGAC GAGCACGGGA TCATGCTGAT TGCCGATGAA
GTGCAGAGCG GCGCGGGGCG TACCGGCACG CTGTTTGCGA TGGAGCAGAT GGGCGTTGCG
CCGGATCTTA CCACCTTTGC GAAATCGATC GCGGGCGGCT TCCCGCTGGC GGGCGTCACC
GGGCGCGCGG AAGTAATGGA TGCCGTCGCT CCAGGCGGTC TGGGCGGCAC CTATGCGGGT
AACCCGATTG CCTGCGTGGC TGCGCTGGAA GTGTTGAAGG TGTTTGAGCA GGAAAATCTG
CTGCAAAAAG CCAACGATCT GGGGCAGAAG TTGAAAGACG GATTGCTGGC GATAGCCGAA
AAACACCCGG AGATCGGCGA CGTACGCGGG CTGGGGGCGA TGATCGCCAT TGAGCTGTTT
GAAGACGGCG ATCACAACAA GCCGGACGCC AAACTCACCG CCGAGATCGT GGCTCGCGCC
CGCGATAAAG GCCTGATTCT TCTCTCCTGC GGCCCGTATT ACAACGTGCT GCGCATCCTT
GTACCGCTCA CCATTGAAGA CGCTCAGATC CGTCAGGGTC TGGAGATCAT CAGCCAGTGT
TTTGATGAGG CGAAGCAGTA G
|
|---|
| Protein sequence | MNSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE
DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYASSPA FMQRLRALCD EHGIMLIADE
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG
NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHPEIGDVRG LGAMIAIELF
EDGDHNKPDA KLTAEIVARA RDKGLILLSC GPYYNVLRIL VPLTIEDAQI RQGLEIISQC
FDEAKQ
|
|---|
| |