Gene EcDH1_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1018 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1086976 
End bp1087425 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID 
ProductPeptidoglycan-binding LysM 
Protein accessionACX38699 
Protein GI260448277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCTGT TCAATTTTGT GAAAGATGCC GGAGAAAAAC TCTGGGACGC GGTTACAGGT 
CAGCACGATA AAGACGATCA GGCGAAGAAG GTGCAGGAGC ATCTGAACAA AACCGGTATA
CCGGATGCCG ATAAAGTGAA TATTCAAATT GCCGACGGCA AAGCGACGGT CACTGGTGAC
GGCCTGAGTC AGGAGGCGAA GGAGAAAATC CTTGTTGCGG TGGGGAATAT TTCCGGTATT
GCCAGTGTCG ATGATCAGGT GAAAACGGCG ACACCAGCCA CTGCCAGCCA GTTTTATACC
GTTAAGTCTG GCGACACTCT GAGTGCCATT TCCAAACAGG TCTACGGTAA CGCTAATCTG
TACAATAAAA TCTTCGAAGC GAATAAACCG ATGCTAAAAA GCCCGGATAA AATTTATCCG
GGGCAAGTGT TGCGTATTCC GGAAGAGTAG
 
Protein sequence
MGLFNFVKDA GEKLWDAVTG QHDKDDQAKK VQEHLNKTGI PDADKVNIQI ADGKATVTGD 
GLSQEAKEKI LVAVGNISGI ASVDDQVKTA TPATASQFYT VKSGDTLSAI SKQVYGNANL
YNKIFEANKP MLKSPDKIYP GQVLRIPEE