Gene EcDH1_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1007 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1079301 
End bp1080260 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content48% 
IMG OID 
ProductRibonucleoside-diphosphate reductase 
Protein accessionACX38688 
Protein GI260448266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00862585 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT CACGTATCAG CGCCATCAAC TGGAACAAGA TATCTGACGA TAAAGATCTG 
GAGGTGTGGA ATCGCCTGAC CAGCAATTTC TGGCTACCAG AAAAGGTGCC GCTGTCGAAC
GATATTCCTG CCTGGCAGAC ATTAACTGTC GTAGAACAAC AACTGACGAT GCGCGTTTTT
ACTGGCCTGA CGCTGCTCGA CACGCTGCAA AATGTTATCG GCGCGCCTTC TCTGATGCCC
GATGCACTCA CGCCTCATGA AGAAGCGGTA TTATCGAATA TCAGCTTTAT GGAAGCGGTT
CATGCCCGCT CTTACAGTTC GATTTTCTCG ACGCTATGCC AGACCAAAGA TGTCGATGCC
GCCTACGCCT GGAGTGAAGA AAACGCACCG TTGCAGCGAA AAGCTCAGAT TATTCAGCAA
CATTATCGCG GTGATGATCC GCTGAAAAAG AAAATCGCCA GTGTGTTTCT TGAATCTTTT
TTGTTCTATT CCGGTTTCTG GCTGCCGATG TATTTTTCCA GCCGCGGAAA GCTGACCAAT
ACCGCGGACC TGATCCGTCT GATTATCCGC GATGAAGCAG TCCACGGTTA CTACATAGGC
TATAAATATC AGAAAAACAT GGAAAAGATA TTTCTGGGAC AACGTGAAGA GTTGAAGAGT
TTCGCCTTCG ATTTGTTGCT GGAACTCTAC GACAACGAGT TGCAATACAC CGATGAGCTG
TACGCCGAAA CCCCGTGGGC TGACGATGTG AAAGCGTTTC TCTGTTACAA CGCCAATAAG
GCTTTGATGA ATCTGGGCTA CGAACCGTTA TTTCCCGCAG AAATGGCGGA AGTGAATCCG
GCAATCCTCG CCGCGCTTTC GCCGAATGCC GATGAAAATC ACGATTTCTT TTCCGGTTCA
GGCTCCTCTT ATGTGATGGG GAAAGCGGTT GAAACAGAAG ATGAAGACTG GAATTTCTGA
 
Protein sequence
MKLSRISAIN WNKISDDKDL EVWNRLTSNF WLPEKVPLSN DIPAWQTLTV VEQQLTMRVF 
TGLTLLDTLQ NVIGAPSLMP DALTPHEEAV LSNISFMEAV HARSYSSIFS TLCQTKDVDA
AYAWSEENAP LQRKAQIIQQ HYRGDDPLKK KIASVFLESF LFYSGFWLPM YFSSRGKLTN
TADLIRLIIR DEAVHGYYIG YKYQKNMEKI FLGQREELKS FAFDLLLELY DNELQYTDEL
YAETPWADDV KAFLCYNANK ALMNLGYEPL FPAEMAEVNP AILAALSPNA DENHDFFSGS
GSSYVMGKAV ETEDEDWNF