Gene EcDH1_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0998 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1069608 
End bp1071146 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content57% 
IMG OID 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionACX38680 
Protein GI260448258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.614852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAACTGGTCA TTATGACGAT TGCGCTGTCA 
CTGGCGACAT TCATGCAGGT GCTGGACTCC ACCATTGCTA ACGTGGCGAT CCCCACTATC
GCCGGGAATC TGGGCTCATC GCTCAGCCAG GGAACGTGGG TAATCACTTC TTTCGGGGTG
GCGAATGCCA TCTCGATCCC GCTTACCGGC TGGCTGGCAA AGCGCGTCGG GGAAGTGAAA
CTGTTCCTTT GGTCCACCAT CGCCTTTGCT ATTGCGTCGT GGGCGTGTGG TGTCTCCAGC
AGCCTGAATA TGCTGATCTT CTTCCGCGTG ATTCAGGGGA TTGTCGCCGG GCCGTTGATC
CCGCTTTCGC AAAGTCTATT GCTGAATAAC TACCCGCCAG CCAAACGCTC GATCGCGCTG
GCGTTGTGGT CGATGACGGT GATTGTCGCG CCAATTTGCG GCCCGATCCT CGGCGGTTAT
ATCAGCGATA ATTACCACTG GGGCTGGATA TTCTTCATCA ACGTGCCGAT TGGCGTGGCG
GTGGTGTTGA TGACACTGCA AACTCTGCGC GGACGTGAAA CCCGCACCGA ACGGCGGCGG
ATTGATGCCG TGGGGCTGGC ACTGCTGGTT ATTGGTATCG GCAGCCTGCA GATTATGCTC
GACCGCGGTA AAGAGCTGGA CTGGTTTTCA TCACAGGAAA TTATCATCCT TACCGTGGTG
GCGGTGGTGG CTATCTGCTT CCTGATTGTC TGGGAGCTGA CCGACGATAA CCCGATAGTC
GATCTGTCGT TGTTTAAGTC GCGCAACTTC ACCATCGGCT GCTTGTGTAT CAGCCTCGCG
TATATGCTCT ACTTCGGCGC TATTGTTCTG CTGCCGCAGT TGTTGCAGGA GGTCTACGGT
TACACGGCGA CCTGGGCAGG TTTGGCCTCT GCGCCGGTAG GGATTATTCC GGTGATCCTG
TCGCCGATTA TCGGCCGCTT CGCGCATAAA CTGGATATGC GGCGGCTGGT AACCTTCAGC
TTTATTATGT ATGCCGTCTG CTTCTACTGG CGTGCCTATA CCTTTGAACC AGGTATGGAT
TTTGGCGCGT CGGCCTGGCC GCAGTTTATC CAGGGGTTTG CGGTGGCCTG CTTCTTTATG
CCGCTGACCA CCATTACGCT GTCTGGTTTG CCACCGGAAC GACTGGCGGC GGCATCGAGC
CTCTCTAACT TTACGCGAAC GCTGGCGGGG TCTATCGGCA CGTCGATAAC CACGACCATG
TGGACCAACC GCGAGTCGAT GCACCATGCG CAGTTGACTG AGTCGGTAAA CCCGTTCAAC
CCGAATGCCC AGGCGATGTA CAGTCAACTG GAAGGGCTTG GGATGACGCA ACAGCAGGCA
TCAGGCTGGA TTGCCCAGCA GATCACCAAT CAGGGGCTGA TTATTTCCGC CAATGAGATC
TTCTGGATGT CAGCCGGGAT ATTCCTCGTC CTGCTGGGGC TGGTGTGGTT TGCTAAACCG
CCATTTGGCG CAGGTGGCGG CGGAGGCGGT GCGCACTAA
 
Protein sequence
MQQQKPLEGA QLVIMTIALS LATFMQVLDS TIANVAIPTI AGNLGSSLSQ GTWVITSFGV 
ANAISIPLTG WLAKRVGEVK LFLWSTIAFA IASWACGVSS SLNMLIFFRV IQGIVAGPLI
PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGVA
VVLMTLQTLR GRETRTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV
AVVAICFLIV WELTDDNPIV DLSLFKSRNF TIGCLCISLA YMLYFGAIVL LPQLLQEVYG
YTATWAGLAS APVGIIPVIL SPIIGRFAHK LDMRRLVTFS FIMYAVCFYW RAYTFEPGMD
FGASAWPQFI QGFAVACFFM PLTTITLSGL PPERLAAASS LSNFTRTLAG SIGTSITTTM
WTNRESMHHA QLTESVNPFN PNAQAMYSQL EGLGMTQQQA SGWIAQQITN QGLIISANEI
FWMSAGIFLV LLGLVWFAKP PFGAGGGGGG AH