Gene EcDH1_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0988 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1058187 
End bp1059272 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content55% 
IMG OID 
Productlytic murein transglycosylase B 
Protein accessionACX38671 
Protein GI260448249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.232611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAAGC GTCGTTATGT AACATTGCTT CCCCTTTTTG TGTTGCTTGC CGCCTGTAGC 
AGCAAGCCAA AACCTACTGA GACTGATACG ACCACCGGAA CGCCGTCTGG CGGCTTCCTG
CTTGAGCCGC AGCACAATGT GATGCAGATG GGCGGCGATT TCGCTAATAA CCCGAATGCC
CAGCAGTTCA TCGACAAAAT GGTGAACAAA CACGGTTTCG ATCGTCAGCA GTTGCAGGAA
ATTCTCTCCC AGGCGAAGCG TCTGGATTCG GTACTGCGGC TGATGGATAA CCAGGCACCA
ACCACATCGG TGAAACCGCC ATCAGGTCCG AACGGCGCAT GGCTCCGTTA TCGCAAAAAA
TTTATTACGC CGGACAACGT GCAGAACGGT GTGGTTTTCT GGAATCAGTA TGAAGATGCG
TTGAATCGCG CGTGGCAGGT GTATGGAGTA CCGCCGGAAA TTATCGTCGG GATTATCGGC
GTTGAAACCC GCTGGGGGCG CGTGATGGGG AAAACTCGCA TCCTCGATGC GCTGGCAACG
CTGTCATTTA ACTACCCACG CCGCGCGGAG TATTTCTCTG GCGAGCTGGA AACCTTCCTG
TTGATGGCGC GCGACGAGCA GGACGATCCG CTCAATCTGA AAGGTTCCTT TGCCGGGGCG
ATGGGCTACG GACAGTTTAT GCCGTCGTCT TACAAACAAT ATGCGGTAGA TTTCAGCGGC
GACGGGCATA TCAACCTGTG GGATCCGGTT GATGCGATCG GTAGCGTGGC GAACTATTTC
AAAGCGCACG GCTGGGTGAA AGGCGATCAG GTCGCGGTAA TGGCAAACGG TCAGGCTCCA
GGCTTGCCAA ATGGCTTCAA AACTAAGTAC AGCATTTCGC AGCTTGCCGC CGCAGGTTTA
ACGCCACAGC AGCCGCTGGG CAACCATCAA CAAGCCAGCC TGCTGCGTCT GGATGTTGGC
ACCGGCTACC AGTACTGGTA CGGTCTGCCG AACTTCTACA CCATCACCCG TTACAACCAC
AGCACCCATT ACGCAATGGC GGTCTGGCAG TTAGGACAAG CCGTGGCGCT GGCGCGAGTA
CAGTAG
 
Protein sequence
MFKRRYVTLL PLFVLLAACS SKPKPTETDT TTGTPSGGFL LEPQHNVMQM GGDFANNPNA 
QQFIDKMVNK HGFDRQQLQE ILSQAKRLDS VLRLMDNQAP TTSVKPPSGP NGAWLRYRKK
FITPDNVQNG VVFWNQYEDA LNRAWQVYGV PPEIIVGIIG VETRWGRVMG KTRILDALAT
LSFNYPRRAE YFSGELETFL LMARDEQDDP LNLKGSFAGA MGYGQFMPSS YKQYAVDFSG
DGHINLWDPV DAIGSVANYF KAHGWVKGDQ VAVMANGQAP GLPNGFKTKY SISQLAAAGL
TPQQPLGNHQ QASLLRLDVG TGYQYWYGLP NFYTITRYNH STHYAMAVWQ LGQAVALARV
Q