Gene EcDH1_0932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0932 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1003376 
End bp1003975 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionACX38615 
Protein GI260448193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTCA GTAAAGTCAT CATTGCCAGG GCCTGGAGCA GGGATCTTTA CCAACTTCAC 
CAGGGATTAT GGCATTTATT TCCAAACAGA CCGGATGCTG CTCGTGATTT TCTTTTTCAT
GTTGAGAAGC GAAACACACC AGAAGGCTGT CATGTTTTAT TGCAGTCAGC GCAAATGCCT
GTTTCAACTG CCGTTGCGAC AGTCATTAAA ACTAAACAGG TTGAATTTCA ACTTCAGGTT
GGTGTTCCAC TCTATTTTCG GCTTCGGGCA AATCCGATCA AAACTATTCT CGACAATCAA
AAGCGCCTGG ACAGTAAAGG GAATATTAAA CGCTGTCGGG TTCCGTTAAT AAAAGAAGCA
GAACAAATCG CGTGGTTGCA ACGTAAATTG GGCAATGCGG CGCGCGTTGA AGATGTGCAT
CCCATATCGG AACGGCCACA GTATTTTTCT GGTGATGGTA AAAGTGGAAA GATCCAAACG
GTTTGCTTTG AAGGTGTGCT CACCATCAAC GACGCGCCAG CGTTAATAGA TCTTGTACAG
CAAGGTATTG GGCCAGCTAA ATCGATGGGA TGTGGCTTGC TATCTTTGGC TCCACTGTGA
 
Protein sequence
MYLSKVIIAR AWSRDLYQLH QGLWHLFPNR PDAARDFLFH VEKRNTPEGC HVLLQSAQMP 
VSTAVATVIK TKQVEFQLQV GVPLYFRLRA NPIKTILDNQ KRLDSKGNIK RCRVPLIKEA
EQIAWLQRKL GNAARVEDVH PISERPQYFS GDGKSGKIQT VCFEGVLTIN DAPALIDLVQ
QGIGPAKSMG CGLLSLAPL