Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0806 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 852832 |
End bp | 854751 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | glutamate synthase, small subunit |
Protein accession | ACX38490 |
Protein GI | 260448068 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGT TTATTGCTGC TGAAGCTGCG GAATGTATAG GCTGTCATGC TTGTGAAATT GCCTGTGCGG TGGCACACAA TCAAGAAAAC TGGCCGCTGA GTCACAGTGA CTTTCGACCG CGTATCCACG TTGTAGGGAA AGGCCAGGCT GCGAATCCGG TGGCCTGCCA TCACTGCAAC AATGCCCCTT GCGTTACGGC TTGTCCGGTT AATGCTCTGA CTTTCCAGTC CGATAGCGTA CAACTGGACG AGCAAAAATG TATTGGTTGT AAAAGATGCG CAATCGCTTG CCCCTTTGGC GTCGTTGAGA TGGTCGATAC GATTGCGCAG AAATGCGACC TTTGTAACCA GCGCAGTTCC GGCACGCAAG CCTGTATTGA AGTTTGCCCA ACACAGGCGT TACGACTGAT GGACGATAAA GGGTTGCAGC AGATAAAGGT GGCCCGCCAG CGCAAAACGG CAGCAGGAAA AGCGTCATCA GACGCTCAGC CATCTCGCAG TGCAGCGTTG CTCCCCGTTA ACTCGCGTAA AGGCGCAGAT AAAATTTCAG CGAGTGAACG GAAAACCCAC TTTGGCGAAA TATATTGCGG GCTGGATCCA CAACAAGCGA CTTATGAGAG TGACCGCTGT GTTTATTGTG CCGAAAAAGC TAACTGCAAC TGGCATTGCC CGCTGCATAA CGCTATTCCG GATTACATCC GTCTGGTACA GGAAGGAAAG ATTATTGAAG CGGCAGAACT TTGCCACCAG ACCAGTTCCT TACCAGAAAT TTGCGGCAGG GTATGTCCAC AGGACCGTCT TTGTGAAGGC GCATGTACTT TGAAAGATCA CTCGGGCGCA GTCTCTATCG GTAATCTGGA ACGCTACATC ACCGATACCG CGCTGGCGAT GGGCTGGCGT CCCGATGTCA GCAAAGTTGT TCCCCGTAGC GAAAAAGTGG CGGTGATTGG CGCTGGGCCT GCAGGGTTAG GGTGTGCTGA TATTCTGGCG CGCGCAGGAG TTCAGGTCGA TGTCTTTGAT CGCCATCCAG AAATTGGCGG TATGCTGACT TTTGGCATTC CTCCTTTCAA ACTCGATAAA ACGGTATTAA GCCAGCGGCG AGAGATATTC ACCGCAATGG GAATCGACTT TCATCTTAAC TGTGAAATTG GCCGCGATAT TACCTTTAGC GATTTAACTT CTGAATATGA TGCAGTTTTC ATCGGCGTGG GGACTTACGG GATGATGCGA GCAGATCTGC CGCATGAAGA TGCGCCCGGT GTCATTCAGG CTCTACCGTT CCTGACTGCC CATACCCGCC AGCTCATGGG ATTGCCGGAG TCTGAAGAGT ATCCGCTGAC GGACGTGGAA GGTAAGCGAG TCGTGGTATT GGGCGGTGGC GATACGACAA TGGATTGTTT GCGGACTTCC ATCCGCCTCA ATGCCGCCAG CGTGACCTGC GCGTATCGTC GTGATGAAGT CAGTATGCCG GGCTCGCGCA AAGAGGTGGT TAATGCGCGC GAGGAAGGTG TCGAGTTTCA GTTCAATGTT CAACCGCAAT ATATCGCTTG TGACGAAGAT GGGCGTTTAA CTGCGGTGGG CCTGATTCGT ACCGCCATGG GTGAGCCGGG GCCGGATGGT CGCCGTCGTC CTCGTCCGGT AGCGGGTTCA GAGTTTGAAT TGCCCGCCGA TGTTCTGATT ATGGCCTTTG GTTTCCAGGC GCATGCCATG CCGTGGTTGC AGGGCAGCGG AATTAAACTC GATAAATGGG GCCTGATTCA AACCGGTGAC GTCGGGTATT TACCTACCCA GACGCATCTG AAAAAAGTCT TTGCTGGTGG TGATGCAGTT CATGGCGCGG ATCTGGTTGT CACTGCAATG GCCGCAGGAA GGCAGGCGGC GCGCGATATG TTAACTCTGT TTGATACGAA GGCATCGTGA
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Protein sequence | MNKFIAAEAA ECIGCHACEI ACAVAHNQEN WPLSHSDFRP RIHVVGKGQA ANPVACHHCN NAPCVTACPV NALTFQSDSV QLDEQKCIGC KRCAIACPFG VVEMVDTIAQ KCDLCNQRSS GTQACIEVCP TQALRLMDDK GLQQIKVARQ RKTAAGKASS DAQPSRSAAL LPVNSRKGAD KISASERKTH FGEIYCGLDP QQATYESDRC VYCAEKANCN WHCPLHNAIP DYIRLVQEGK IIEAAELCHQ TSSLPEICGR VCPQDRLCEG ACTLKDHSGA VSIGNLERYI TDTALAMGWR PDVSKVVPRS EKVAVIGAGP AGLGCADILA RAGVQVDVFD RHPEIGGMLT FGIPPFKLDK TVLSQRREIF TAMGIDFHLN CEIGRDITFS DLTSEYDAVF IGVGTYGMMR ADLPHEDAPG VIQALPFLTA HTRQLMGLPE SEEYPLTDVE GKRVVVLGGG DTTMDCLRTS IRLNAASVTC AYRRDEVSMP GSRKEVVNAR EEGVEFQFNV QPQYIACDED GRLTAVGLIR TAMGEPGPDG RRRPRPVAGS EFELPADVLI MAFGFQAHAM PWLQGSGIKL DKWGLIQTGD VGYLPTQTHL KKVFAGGDAV HGADLVVTAM AAGRQAARDM LTLFDTKAS
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