Gene EcDH1_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0769 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp813956 
End bp814816 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content50% 
IMG OID 
ProductMscS Mechanosensitive ion channel 
Protein accessionACX38453 
Protein GI260448031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATT TGAATGTTGT CGATAGCATA AACGGCGCGG GAAGCTGGCT GGTAGCTAAC 
CAGGCGCTGC TGCTAAGTTA TGCAGTAAAC ATCGTGGCGG CACTCGCGAT CATCATCGTT
GGTTTGATTA TCGCGCGGAT GATTTCCAAC GCGGTGAATC GCCTGATGAT CTCCCGTAAA
ATCGATGCCA CTGTTGCTGA TTTTCTTTCT GCATTAGTCC GTTACGGTAT TATCGCCTTT
ACGCTAATCG CTGCACTGGG ACGCGTGGGT GTACAAACCG CGTCAGTCAT TGCTGTACTC
GGTGCCGCAG GCTTAGCTGT TGGTCTGGCT TTGCAGGGGT CACTGTCTAA CCTGGCCGCT
GGCGTGTTAC TTGTCATGTT CCGCCCGTTC CGTGCCGGAG AATATGTTGA CCTGGGCGGC
GTAGCCGGTA CTGTGCTGAG TGTGCAGATT TTCTCCACCA CCATGCGTAC TGCAGACGGT
AAAATTATCG TTATTCCGAA CGGTAAAATT ATTGCCGGAA ATATTATTAA CTTCTCCCGC
GAGCCAGTTC GCCGTAACGA ATTTATTATT GGCGTGGCGT ATGATTCCGA TATCGATCAG
GTTAAGCAGA TCCTGACCAA TATTATCCAG TCTGAAGATC GCATTTTGAA AGATCGCGAA
ATGACTGTGC GCCTGAACGA ACTTGGTGCA TCGTCGATTA ATTTCGTGGT CCGCGTCTGG
AGCAACAGCG GCGATCTGCA AAACGTGTAC TGGGATGTGC TGGAGCGTAT TAAACGTGAA
TTTGATGCCG CCGGTATCAG CTTCCCGTAC CCGCAAATGG ATGTGAACTT TAAGCGGGTG
AAAGAAGACA AAGCTGCGTA A
 
Protein sequence
MEDLNVVDSI NGAGSWLVAN QALLLSYAVN IVAALAIIIV GLIIARMISN AVNRLMISRK 
IDATVADFLS ALVRYGIIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA
GVLLVMFRPF RAGEYVDLGG VAGTVLSVQI FSTTMRTADG KIIVIPNGKI IAGNIINFSR
EPVRRNEFII GVAYDSDIDQ VKQILTNIIQ SEDRILKDRE MTVRLNELGA SSINFVVRVW
SNSGDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KEDKAA