Gene EcDH1_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0596 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp629550 
End bp630446 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX38283 
Protein GI260447861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAG AAAGGGCATT AACGCTGGAA GCACTACGGG TTATGGATGC GATCGATCGC 
CGGGGCAGTT TTGCGGCGGC GGCGGATGAG CTGGGACGCG TGCCTTCCGC ACTTAGCTAC
ACCATGCAAA AACTGGAAGA AGAGCTGGAT GTGGTGCTGT TTGACCGCTC GGGCCATCGT
ACCAAATTCA CCAATGTCGG GAGGATGTTG TTGGAGCGAG GGCGCGTTTT GCTGGAAGCC
GCAGATAAAC TGACTACTGA TGCGGAAGCT CTCGCGCGCG GTTGGGAAAC GCATCTCACC
ATTGTGACCG AAGCGCTGGT ACCGACACCT GCCTTTTTCC CGTTAATCGA CAAACTGGCG
GCAAAAGCCA ATACCCAACT GGCAATCATC ACAGAAGTGC TGGCGGGGGC GTGGGAACGG
CTGGAGCAGG GGCGGGCGGA TATTGTTATC GCGCCGGATA TGCATTTTCG TTCCTCGTCG
GAGATCAACT CGCGCAAGCT CTATACGTTA ATGAACGTCT ACGTTGCCGC GCCTGATCAC
CCGATTCATC AGGAGCCGGA ACCGTTATCT GAAGTGACGC GTGTGAAATA TCGTGGAATT
GCGGTGGCGG ATACCGCTCG TGAGCGCCCG GTGTTGACCG TACAGCTGCT GGACAAACAG
CCGCGCTTAA CGGTGAGCAC GATTGAAGAT AAACGTCAGG CATTACTGGC GGGGCTTGGC
GTGGCGACGA TGCCGTATCC TATGGTCGAA AAAGATATTG CGGAAGGGCG GTTGCGTGTC
GTCAGCCCGG AATCGACCAG CGAGATCGAT ATTATTATGG CCTGGCGTCG TGACAGTATG
GGGGAAGCGA AATCCTGGTG TCTGCGGGAA ATTCCCAAAC TTTTTAACGG AAAATAA
 
Protein sequence
MAKERALTLE ALRVMDAIDR RGSFAAAADE LGRVPSALSY TMQKLEEELD VVLFDRSGHR 
TKFTNVGRML LERGRVLLEA ADKLTTDAEA LARGWETHLT IVTEALVPTP AFFPLIDKLA
AKANTQLAII TEVLAGAWER LEQGRADIVI APDMHFRSSS EINSRKLYTL MNVYVAAPDH
PIHQEPEPLS EVTRVKYRGI AVADTARERP VLTVQLLDKQ PRLTVSTIED KRQALLAGLG
VATMPYPMVE KDIAEGRLRV VSPESTSEID IIMAWRRDSM GEAKSWCLRE IPKLFNGK