Gene EcDH1_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0555 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp586780 
End bp587355 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID 
Producttransport-associated 
Protein accessionACX38243 
Protein GI260447821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAT TATCGCCAAT CGCAGTCCTT ATTTCCGCGC TGCTGTTGCA AGGTTGTGTT 
GCCGCTGCCG TAGTGGGTAC CGCTGCTGTG GGTACCAAAG CCGCAACTGA CCCACGCAGT
GTCGGCACCC AGGTGGACGA TGGTACCCTG GAAGTGCGCG TGAACAGCGC ATTGTCGAAA
GACGAACAGA TTAAGAAAGA AGCGCGCATT AATGTAACGG CCTATCAGGG CAAAGTGCTG
CTGGTTGGGC AGTCACCAAA TGCTGAACTT TCGGCTCGCG CCAAACAGAT TGCTATGGGC
GTAGACGGTG CCAACGAAGT GTATAACGAG ATTCGTCAGG GCCAGCCGAT TGGTCTGGGC
GAAGCATCTA ACGATACGTG GATCACCACC AAAGTGCGTT CGCAGCTCTT AACCAGCGAC
CTGGTGAAAT CGTCCAACGT GAAAGTGACC ACCGAAAACG GTGAAGTGTT CCTGATGGGG
CTGGTGACTG AACGTGAAGC GAAAGCGGCG GCAGATATTG CCAGCCGGGT GAGCGGCGTG
AAGCGGGTAA CTACGGCGTT TACGTTTATT AAATAG
 
Protein sequence
MKALSPIAVL ISALLLQGCV AAAVVGTAAV GTKAATDPRS VGTQVDDGTL EVRVNSALSK 
DEQIKKEARI NVTAYQGKVL LVGQSPNAEL SARAKQIAMG VDGANEVYNE IRQGQPIGLG
EASNDTWITT KVRSQLLTSD LVKSSNVKVT TENGEVFLMG LVTEREAKAA ADIASRVSGV
KRVTTAFTFI K