Gene EcDH1_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0536 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp566238 
End bp567725 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNusA antitermination factor 
Protein accessionACX38224 
Protein GI260447802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAG AAATTTTGGC TGTAGTTGAA GCCGTATCCA ATGAAAAGGC GCTACCTCGC 
GAGAAGATTT TCGAAGCATT GGAAAGCGCG CTGGCGACAG CAACAAAGAA AAAATATGAA
CAAGAGATCG ACGTCCGCGT ACAGATCGAT CGCAAAAGCG GTGATTTTGA CACTTTCCGT
CGCTGGTTAG TTGTTGATGA AGTCACCCAG CCGACCAAGG AAATCACCCT TGAAGCCGCA
CGTTATGAAG ATGAAAGCCT GAACCTGGGC GATTACGTTG AAGATCAGAT TGAGTCTGTT
ACCTTTGACC GTATCACTAC CCAGACGGCA AAACAGGTTA TCGTGCAGAA AGTGCGTGAA
GCCGAACGTG CGATGGTGGT TGATCAGTTC CGTGAACACG AAGGTGAAAT CATCACCGGC
GTGGTGAAAA AAGTAAACCG CGACAACATC TCTCTGGATC TGGGCAACAA CGCTGAAGCC
GTGATCCTGC GCGAAGATAT GCTGCCGCGT GAAAACTTCC GCCCTGGCGA CCGCGTTCGT
GGCGTGCTCT ATTCCGTTCG CCCGGAAGCG CGTGGCGCGC AACTGTTCGT CACTCGTTCC
AAGCCGGAAA TGCTGATCGA ACTGTTCCGT ATTGAAGTGC CAGAAATCGG CGAAGAAGTG
ATTGAAATTA AAGCAGCGGC TCGCGATCCG GGTTCTCGTG CGAAAATCGC GGTGAAAACC
AACGATAAAC GTATCGATCC GGTAGGTGCT TGCGTAGGTA TGCGTGGCGC GCGTGTTCAG
GCGGTGTCTA CTGAACTGGG TGGCGAGCGT ATCGATATCG TCCTGTGGGA TGATAACCCG
GCGCAGTTCG TGATTAACGC AATGGCACCG GCAGACGTTG CTTCTATCGT GGTGGATGAA
GATAAACACA CCATGGATAT CGCCGTTGAA GCCGGTAACC TGGCGCAGGC GATTGGCCGT
AACGGTCAGA ACGTGCGTCT GGCTTCGCAG CTGAGCGGTT GGGAACTCAA CGTGATGACC
GTTGACGACC TGCAGGCTAA GCATCAGGCG GAAGCGCACG CAGCGATCGA CACCTTCACC
AAATATCTCG ACATCGACGA AGACTTCGCG ACTGTTCTGG TAGAAGAAGG CTTCTCGACG
CTGGAAGAAT TGGCCTATGT GCCGATGAAA GAGCTGTTGG AAATCGAAGG CCTTGATGAG
CCGACCGTTG AAGCACTGCG CGAGCGTGCT AAAAATGCAC TGGCCACCAT TGCACAGGCC
CAGGAAGAAA GCCTCGGTGA TAACAAACCG GCTGACGATC TGCTGAACCT TGAAGGGGTA
GATCGTGATT TGGCATTCAA ACTGGCCGCC CGTGGCGTTT GTACGCTGGA AGATCTCGCC
GAACAGGGCA TTGATGATCT GGCTGATATC GAAGGGTTGA CCGACGAAAA AGCCGGAGCA
CTGATTATGG CTGCCCGTAA TATTTGCTGG TTCGGTGACG AAGCGTAA
 
Protein sequence
MNKEILAVVE AVSNEKALPR EKIFEALESA LATATKKKYE QEIDVRVQID RKSGDFDTFR 
RWLVVDEVTQ PTKEITLEAA RYEDESLNLG DYVEDQIESV TFDRITTQTA KQVIVQKVRE
AERAMVVDQF REHEGEIITG VVKKVNRDNI SLDLGNNAEA VILREDMLPR ENFRPGDRVR
GVLYSVRPEA RGAQLFVTRS KPEMLIELFR IEVPEIGEEV IEIKAAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSTELGGER IDIVLWDDNP AQFVINAMAP ADVASIVVDE
DKHTMDIAVE AGNLAQAIGR NGQNVRLASQ LSGWELNVMT VDDLQAKHQA EAHAAIDTFT
KYLDIDEDFA TVLVEEGFST LEELAYVPMK ELLEIEGLDE PTVEALRERA KNALATIAQA
QEESLGDNKP ADDLLNLEGV DRDLAFKLAA RGVCTLEDLA EQGIDDLADI EGLTDEKAGA
LIMAARNICW FGDEA