Gene EcDH1_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0529 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp556820 
End bp558763 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content54% 
IMG OID 
ProductATP-dependent metalloprotease FtsH 
Protein accessionACX38217 
Protein GI260447795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.7152e-11 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGACA TGGCGAAAAA CCTAATACTC TGGCTGGTCA TTGCCGTTGT GCTGATGTCA 
GTATTCCAGA GCTTTGGGCC CAGCGAGTCT AATGGCCGTA AGGTGGATTA CTCTACCTTC
CTACAAGAGG TCAATAACGA CCAGGTTCGT GAAGCGCGTA TCAACGGACG TGAAATCAAC
GTTACCAAGA AAGATAGTAA CCGTTATACC ACTTACATTC CGGTTCAGGA TCCGAAATTA
CTGGATAACC TGTTGACCAA GAACGTCAAG GTTGTCGGTG AACCGCCTGA AGAACCAAGC
CTGCTGGCTT CTATCTTCAT CTCCTGGTTC CCGATGCTGT TGCTGATTGG TGTCTGGATC
TTCTTCATGC GTCAAATGCA GGGCGGCGGT GGCAAAGGTG CCATGTCGTT TGGTAAGAGC
AAAGCGCGCA TGCTGACGGA AGATCAGATC AAAACGACCT TTGCTGACGT TGCGGGCTGC
GACGAAGCAA AAGAAGAAGT TGCTGAACTG GTTGAGTATC TGCGCGAGCC GAGCCGCTTC
CAGAAACTCG GCGGTAAGAT CCCGAAAGGC GTCTTGATGG TCGGTCCTCC GGGTACCGGT
AAAACGCTGC TGGCGAAAGC GATTGCAGGC GAAGCGAAAG TTCCGTTCTT TACTATCTCC
GGTTCTGACT TCGTAGAAAT GTTCGTCGGT GTGGGTGCAT CCCGTGTTCG TGACATGTTC
GAACAGGCGA AGAAAGCGGC ACCGTGCATC ATCTTTATCG ATGAAATCGA CGCCGTAGGC
CGCCAGCGTG GCGCTGGTCT GGGCGGTGGT CACGATGAAC GTGAACAGAC TCTGAACCAG
ATGCTGGTTG AGATGGATGG CTTCGAAGGT AACGAAGGTA TCATCGTTAT CGCCGCGACT
AACCGTCCGG ACGTTCTCGA CCCGGCCCTG CTGCGTCCTG GCCGTTTCGA CCGTCAGGTT
GTGGTCGGCT TGCCAGATGT TCGCGGTCGT GAGCAGATCC TGAAAGTTCA CATGCGTCGC
GTACCATTGG CACCCGATAT CGACGCGGCA ATCATTGCCC GTGGTACTCC TGGTTTCTCC
GGTGCTGACC TGGCGAACCT GGTGAACGAA GCGGCACTGT TCGCTGCTCG TGGCAACAAA
CGCGTTGTGT CGATGGTTGA GTTCGAGAAA GCGAAAGACA AAATCATGAT GGGTGCGGAA
CGTCGCTCCA TGGTGATGAC GGAAGCGCAG AAAGAATCGA CGGCTTACCA CGAAGCGGGT
CATGCGATTA TCGGTCGCCT GGTGCCGGAA CACGATCCGG TGCACAAAGT GACGATTATC
CCACGCGGTC GTGCGCTGGG TGTGACTTTC TTCTTGCCTG AGGGCGACGC AATCAGCGCC
AGCCGTCAGA AACTGGAAAG CCAGATTTCT ACGCTGTACG GTGGTCGTCT GGCAGAAGAG
ATCATCTACG GGCCGGAACA TGTATCTACC GGTGCGTCCA ACGATATTAA AGTTGCGACC
AACCTGGCAC GTAACATGGT GACTCAGTGG GGCTTCTCTG AGAAATTGGG TCCACTGCTG
TACGCGGAAG AAGAAGGTGA AGTGTTCCTC GGCCGTAGCG TAGCGAAAGC GAAACATATG
TCCGATGAAA CTGCACGTAT CATCGACCAG GAAGTGAAAG CACTGATTGA GCGTAACTAT
AATCGTGCGC GTCAGCTTCT GACCGACAAT ATGGATATTC TGCATGCGAT GAAAGATGCT
CTCATGAAAT ATGAGACTAT CGACGCACCG CAGATTGATG ACCTGATGGC ACGTCGCGAT
GTACGTCCGC CAGCGGGCTG GGAAGAACCA GGCGCTTCTA ACAATTCTGG CGACAATGGT
AGTCCAAAGG CTCCTCGTCC GGTTGATGAA CCGCGTACGC CGAACCCGGG TAACACCATG
TCAGAGCAGT TAGGCGACAA GTAA
 
Protein sequence
MSDMAKNLIL WLVIAVVLMS VFQSFGPSES NGRKVDYSTF LQEVNNDQVR EARINGREIN 
VTKKDSNRYT TYIPVQDPKL LDNLLTKNVK VVGEPPEEPS LLASIFISWF PMLLLIGVWI
FFMRQMQGGG GKGAMSFGKS KARMLTEDQI KTTFADVAGC DEAKEEVAEL VEYLREPSRF
QKLGGKIPKG VLMVGPPGTG KTLLAKAIAG EAKVPFFTIS GSDFVEMFVG VGASRVRDMF
EQAKKAAPCI IFIDEIDAVG RQRGAGLGGG HDEREQTLNQ MLVEMDGFEG NEGIIVIAAT
NRPDVLDPAL LRPGRFDRQV VVGLPDVRGR EQILKVHMRR VPLAPDIDAA IIARGTPGFS
GADLANLVNE AALFAARGNK RVVSMVEFEK AKDKIMMGAE RRSMVMTEAQ KESTAYHEAG
HAIIGRLVPE HDPVHKVTII PRGRALGVTF FLPEGDAISA SRQKLESQIS TLYGGRLAEE
IIYGPEHVST GASNDIKVAT NLARNMVTQW GFSEKLGPLL YAEEEGEVFL GRSVAKAKHM
SDETARIIDQ EVKALIERNY NRARQLLTDN MDILHAMKDA LMKYETIDAP QIDDLMARRD
VRPPAGWEEP GASNNSGDNG SPKAPRPVDE PRTPNPGNTM SEQLGDK