Gene EcDH1_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0323 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp364544 
End bp365221 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content48% 
IMG OID 
ProductShikimate kinase 
Protein accessionACX38013 
Protein GI260447591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.63169e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGATT TATTCAGTTG CCAAACCCGC TGGAGTATTG AGATAATTTT CAGTCTGACT 
CTCGCAATAT CTTATGAGGT TTCAGTTCAT GTCCTGCGGC GCTCTCTGAG CGAAGCGGGT
TTATCATTAA CGAATAGTCT TAGTAGTACC GAAAAAATGG CAGAGAAACG CAATATCTTT
CTGGTTGGGC CTATGGGTGC CGGAAAAAGC ACTATTGGGC GCCAGTTAGC TCAACAACTC
AATATGGAAT TTTACGATTC CGATCAAGAG ATTGAGAAAC GAACCGGAGC TGATGTGGGC
TGGGTTTTCG ATTTAGAAGG CGAAGAAGGC TTCCGCGATC GCGAAGAAAA GGTCATCAAT
GAGTTGACCG AGAAACAGGG TATTGTGCTG GCTACTGGCG GCGGCTCTGT GAAATCCCGT
GAAACGCGTA ACCGTCTTTC CGCTCGTGGC GTTGTCGTTT ATCTTGAAAC GACCATCGAA
AAGCAACTTG CACGCACGCA GCGTGATAAA AAACGCCCGT TGCTGCACGT TGAAACACCG
CCGCGTGAAG TTCTGGAAGC GTTGGCCAAT GAACGCAATC CGCTGTATGA AGAGATTGCC
GACGTGACCA TTCGTACTGA TGATCAAAGC GCTAAAGTGG TTGCAAACCA GATTATTCAC
ATGCTGGAAA GCAACTAA
 
Protein sequence
MGDLFSCQTR WSIEIIFSLT LAISYEVSVH VLRRSLSEAG LSLTNSLSST EKMAEKRNIF 
LVGPMGAGKS TIGRQLAQQL NMEFYDSDQE IEKRTGADVG WVFDLEGEEG FRDREEKVIN
ELTEKQGIVL ATGGGSVKSR ETRNRLSARG VVVYLETTIE KQLARTQRDK KRPLLHVETP
PREVLEALAN ERNPLYEEIA DVTIRTDDQS AKVVANQIIH MLESN