Gene EcDH1_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0257 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp286203 
End bp287312 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content54% 
IMG OID 
ProductExtracellular ligand-binding receptor 
Protein accessionACX37948 
Protein GI260447526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGA ATGCGAAAAC TATCATCGCA GGGATGATTG CACTGGCAAT TTCACACACC 
GCTATGGCTG ACGATATTAA AGTCGCCGTT GTCGGCGCGA TGTCCGGCCC GATTGCCCAG
TGGGGCGATA TGGAATTTAA CGGCGCGCGT CAGGCAATTA AAGACATTAA TGCCAAAGGG
GGAATTAAGG GCGATAAACT GGTTGGCGTG GAATATGACG ACGCATGCGA CCCGAAACAA
GCCGTTGCGG TCGCCAACAA AATCGTTAAT GACGGCATTA AATACGTTAT TGGTCATCTG
TGTTCTTCTT CTACCCAGCC TGCGTCAGAT ATCTATGAAG ACGAAGGTAT TCTGATGATC
TCGCCGGGAG CGACCAACCC GGAGCTGACC CAACGCGGTT ATCAACACAT TATGCGTACT
GCCGGGCTGG ACTCTTCCCA GGGGCCAACG GCGGCAAAAT ACATTCTTGA GACGGTGAAG
CCCCAGCGCA TCGCCATCAT TCACGACAAA CAACAGTATG GCGAAGGGCT GGCGCGTTCG
GTGCAGGACG GGCTGAAAGC GGCTAACGCC AACGTCGTCT TCTTCGACGG TATTACCGCC
GGGGAGAAAG ATTTCTCCGC GCTGATCGCC CGCCTGAAAA AAGAAAACAT CGACTTCGTT
TACTACGGCG GTTACTACCC GGAAATGGGG CAGATGCTGC GCCAGGCCCG TTCCGTTGGC
CTGAAAACCC AGTTTATGGG GCCGGAAGGT GTGGGTAATG CGTCGTTGTC GAACATTGCC
GGTGATGCCG CCGAAGGCAT GTTGGTCACT ATGCCAAAAC GCTATGACCA GGATCCGGCA
AACCAGGGCA TCGTTGATGC GCTGAAAGCA GACAAGAAAG ATCCGTCCGG GCCTTATGTC
TGGATCACCT ACGCGGCGGT GCAATCTCTG GCGACTGCCC TTGAGCGTAC CGGCAGCGAT
GAGCCGCTGG CGCTGGTGAA AGATTTAAAA GCTAACGGTG CAAACACCGT GATTGGGCCG
CTGAACTGGG ATGAAAAAGG CGATCTTAAG GGATTTGATT TTGGTGTCTT CCAGTGGCAC
GCCGACGGTT CATCCACGGC AGCCAAGTGA
 
Protein sequence
MKRNAKTIIA GMIALAISHT AMADDIKVAV VGAMSGPIAQ WGDMEFNGAR QAIKDINAKG 
GIKGDKLVGV EYDDACDPKQ AVAVANKIVN DGIKYVIGHL CSSSTQPASD IYEDEGILMI
SPGATNPELT QRGYQHIMRT AGLDSSQGPT AAKYILETVK PQRIAIIHDK QQYGEGLARS
VQDGLKAANA NVVFFDGITA GEKDFSALIA RLKKENIDFV YYGGYYPEMG QMLRQARSVG
LKTQFMGPEG VGNASLSNIA GDAAEGMLVT MPKRYDQDPA NQGIVDALKA DKKDPSGPYV
WITYAAVQSL ATALERTGSD EPLALVKDLK ANGANTVIGP LNWDEKGDLK GFDFGVFQWH
ADGSSTAAK