Gene EcDH1_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0229 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp256960 
End bp258084 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content55% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionACX37921 
Protein GI260447499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCATT TACGCAATAT TTTTAATCTG GGTATCAAAG AGTTGCGCAG TCTGCTCGGT 
GATAAAGCGA TGCTGACGCT GATTGTCTTC TCGTTTACGG TGTCGGTGTA TTCGTCAGCG
ACCGTTACGC CAGGATCGTT GAACCTCGCG CCGATCGCCA TTGCCGATAT GGATCAATCG
CAGTTATCGA ACCGGATCGT TAACAGCTTC TATCGTCCGT GGTTTTTGCC ACCGGAGATG
ATCACCGCCG ATGAGATGGA TGCCGGACTG GACGCCGGAC GCTATACCTT CGCGATAAAT
ATTCCGCCTA ATTTTCAGCG TGATGTCCTC GCCGGACGCC AGCCGGATAT TCAGGTGAAC
GTCGATGCCA CGCGCATGAG CCAGGCATTT ACCGGCAATG GGTATATCCA GAATATTATC
AACGGTGAAG TGAACAGCTT TGTCGCGCGC TACCGTGATA ACAGCGAACC GTTGGTATCG
CTGGAAACCC GGATGCGCTT TAACCCGAAC CTCGATCCCG CGTGGTTTGG CGGGGTGATG
GCGATCATCA ACAACATTAC CATGCTGGCG ATTGTATTGA CCGGATCGGC GCTGATCCGC
GAGCGTGAAC ACGGCACGGT GGAACACTTA CTGGTGATGC CGATAACGCC GTTTGAGATC
ATGATGGCGA AGATCTGGTC GATGGGGCTG GTGGTGCTGG TGGTATCGGG ATTATCGCTG
GTGCTGATGG TGAAAGGTGT ACTGGGCGTA CCGATTGAAG GCTCGATCCC GCTGTTTATG
CTGGGCGTGG CGCTCAGTCT GTTTGCCACC ACGTCAATCG GCATTTTTAT GGGGACGATA
GCGCGTTCAA TGCCGCAACT GGGGCTGCTG GTGATTCTGG TGCTGCTGCC GCTGCAAATG
CTTTCCGGTG GTTCCACGCC GCGCGAAAGT ATGCCGCAGA TGGTGCAGGA CATTATGCTG
ACCATGCCGA CGACACACTT TGTTAGCCTC GCGCAGGCCA TCCTCTACCG GGGTGCCGGA
TTCGAAATCG TCTGGCCGCA GTTTCTGACG CTGATGGCAA TTGGCGGCGC ATTTTTCACC
ATTGCGCTGC TGCGATTCAG GAAGACGATT GGGACAATGG CGTAA
 
Protein sequence
MRHLRNIFNL GIKELRSLLG DKAMLTLIVF SFTVSVYSSA TVTPGSLNLA PIAIADMDQS 
QLSNRIVNSF YRPWFLPPEM ITADEMDAGL DAGRYTFAIN IPPNFQRDVL AGRQPDIQVN
VDATRMSQAF TGNGYIQNII NGEVNSFVAR YRDNSEPLVS LETRMRFNPN LDPAWFGGVM
AIINNITMLA IVLTGSALIR EREHGTVEHL LVMPITPFEI MMAKIWSMGL VVLVVSGLSL
VLMVKGVLGV PIEGSIPLFM LGVALSLFAT TSIGIFMGTI ARSMPQLGLL VILVLLPLQM
LSGGSTPRES MPQMVQDIML TMPTTHFVSL AQAILYRGAG FEIVWPQFLT LMAIGGAFFT
IALLRFRKTI GTMA