Gene EcDH1_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0228 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp254225 
End bp256960 
Gene Length2736 bp 
Protein Length911 aa 
Translation table11 
GC content57% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX37920 
Protein GI260447498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCATC TGGAACTGGT TCCCGTCCCG CCTGTCGCGC AACTGGCGGG CGTGAGCCAG 
CATTATGGAA AAACCGTTGC GCTGAACAAT ATCACTCTCG ATATTCCGGC CCGCTGTATG
GTCGGGCTGA TTGGCCCGGA CGGCGTCGGG AAGTCGAGCT TGTTGTCGTT GATTTCCGGT
GCCCGCGTCA TTGAACAGGG CAATGTGATG GTGCTGGGCG GCGATATGCG CGACCCGAAG
CATCGCCGCG ACGTCTGCCC GCGCATCGCC TGGATGCCGC AGGGGCTGGG CAAAAACCTC
TACCACACCT TGTCGGTGTA TGAAAACGTC GATTTTTTCG CTCGCCTGTT CGGTCACGAC
AAAGCGGAGC GGGAAGTGCG AATCAATGAG CTGCTGACCA GCACCGGGTT AGCACCGTTT
CGCGATCGTC CGGCAGGGAA ACTCTCCGGC GGGATGAAGC AAAAACTTGG GCTGTGCTGC
GCGTTAATCC ACGACCCGGA ACTGTTGATC CTTGATGAGC CAACAACGGG GGTTGACCCG
CTCTCCCGCT CCCAGTTCTG GGATCTGATC GACAGTATTC GCCAGCGGCA GAGCAATATG
AGCGTGCTGG TCGCCACCGC CTATATGGAA GAGGCCGAAC GCTTCGACTG GCTGGTAGCG
ATGAATGCCG GAGAAGTGCT GGCAACTGGC AGCGCCGAAG AGCTACGGCA GCAAACGCAA
AGCGCTACGC TGGAAGAAGC ATTTATAAAT CTGTTACCGC AAGCGCAACG CCAGGCGCAT
CAGGCGGTAG TGATCCCACC GTATCAACCT GAAAACGCAG AGATTGCCAT CGAAGCGCGC
GATCTGACCA TGCGTTTTGG TTCCTTCGTT GCCGTTGATC ACGTTAATTT CCGCATTCCA
CGCGGGGAGA TTTTTGGTTT TCTTGGTTCG AACGGCTGCG GTAAATCCAC CACCATGAAA
ATGCTCACCG GACTGCTGCC CGCCAGCGAA GGTGAGGCGT GGCTGTTCGG GCAACCGGTT
GATCCAAAAG ATATCGATAC CCGCCGTCGG GTGGGCTATA TGTCGCAGGC GTTTTCGCTC
TATAACGAAC TCACCGTGCG GCAAAACCTT GAGTTACATG CCCGTTTGTT TCACATCCCG
GAAGCGGAAA TTCCCGCAAG AGTGGCTGAA ATGAGCGAGC GTTTTAAGCT CAACGACGTT
GAAGATATTC TGCCGGAGTC ATTGCCGCTC GGCATTCGCC AGCGGCTTTC GCTGGCGGTG
GCGGTGATTC ATCGCCCGGA GATGTTAATC CTCGATGAGC CTACTTCTGG TGTCGATCCG
GTGGCGAGGG ATATGTTCTG GCAGTTGATG GTCGATCTCT CGCGCCAGGA CAAAGTGACT
ATCTTCATCT CCACCCACTT TATGAACGAA GCGGAACGTT GCGACCGCAT CTCACTGATG
CACGCCGGAA AAGTGCTTGC CAGCGGTACA CCGCAGGAAC TGGTTGAGAA ACGCGGAGCC
GCCAGTCTGG AAGAGGCATT TATCGCCTAT TTGCAGGAAG CGGCAGGGCA GAGCAACGAA
GCCGAAGCGC CGCCCGTGGT ACACGACACC ACCCACGCGC CGCGTCAGGG ATTTAGCCTG
CGCCGTCTGT TTAGCTACAG CCGCCGCGAA GCGCTGGAAC TGCGACGCGA TCCAGTACGT
TCGACGCTGG CGCTGATGGG AACGGTGATC CTGATGCTGA TAATGGGTTA CGGCATCAGT
ATGGATGTGG AAAACCTGCG CTTTGCGGTG CTCGACCGCG ACCAGACCGT CAGTAGCCAG
GCGTGGACAC TCAACCTCTC CGGTTCCCGT TACTTTATCG AACAGCCGCC GCTCACCAGT
TATGACGAGC TTGATCGTCG GATGCGTGCG GGCGATATCA CGGTGGCGAT TGAGATCCCG
CCCAATTTCG GGCGCGATAT CGCGCGTGGT ACGCCTGTGG AACTCGGCGT CTGGATCGAC
GGAGCGATGC CGAGCCGTGC TGAAACGGTA AAAGGTTACG TGCAGGCCAT GCACCAGAGC
TGGTTACAGG ATGTGGCGAG CCGACAATCG ACACCCGCCA GCCAAAGCGG GCTGATGAAT
ATTGAGACGC GCTATCGCTA TAACCCGGAC GTAAAAAGCC TGCCAGCGAT TGTTCCGGCG
GTGATCCCGC TTCTGCTGAT GATGATCCCG TCAATGCTAA GCGCCCTTAG CGTGGTGCGG
GAAAAAGAGC TTGGGTCGAT TATCAACCTT TACGTGACCC CCACCACGCG TAGTGAATTT
TTGCTTGGTA AACAGTTGCC ATACATCGCG CTGGGGATGC TGAACTTTTT CCTGCTCTGC
GGCCTGTCGG TGTTTGTGTT TGGCGTACCG CATAAAGGCA GTTTCCTGAC GCTCACCCTG
GCGGCGCTGC TGTATATCAT CATTGCCACC GGAATGGGGC TGCTGATCTC CACCTTTATG
AAAAGCCAGA TTGCCGCCAT TTTCGGAACG GCGATTATCA CGTTGATCCC GGCGACACAG
TTTTCCGGGA TGATCGATCC GGTAGCTTCG CTGGAAGGGC CTGGACGTTG GATCGGCGAG
GTTTACCCGA CCAGTCATTT TCTGACTATC GCCCGCGGGA CGTTCTCGAA AGCGCTGGAT
CTGACTGATT TGTGGCAACT TTTTATCCCG TTACTGATAG CCATCCCGCT GGTGATGGGC
TTAAGTATCC TGCTGCTGAA AAAACAGGAG GGATGA
 
Protein sequence
MTHLELVPVP PVAQLAGVSQ HYGKTVALNN ITLDIPARCM VGLIGPDGVG KSSLLSLISG 
ARVIEQGNVM VLGGDMRDPK HRRDVCPRIA WMPQGLGKNL YHTLSVYENV DFFARLFGHD
KAEREVRINE LLTSTGLAPF RDRPAGKLSG GMKQKLGLCC ALIHDPELLI LDEPTTGVDP
LSRSQFWDLI DSIRQRQSNM SVLVATAYME EAERFDWLVA MNAGEVLATG SAEELRQQTQ
SATLEEAFIN LLPQAQRQAH QAVVIPPYQP ENAEIAIEAR DLTMRFGSFV AVDHVNFRIP
RGEIFGFLGS NGCGKSTTMK MLTGLLPASE GEAWLFGQPV DPKDIDTRRR VGYMSQAFSL
YNELTVRQNL ELHARLFHIP EAEIPARVAE MSERFKLNDV EDILPESLPL GIRQRLSLAV
AVIHRPEMLI LDEPTSGVDP VARDMFWQLM VDLSRQDKVT IFISTHFMNE AERCDRISLM
HAGKVLASGT PQELVEKRGA ASLEEAFIAY LQEAAGQSNE AEAPPVVHDT THAPRQGFSL
RRLFSYSRRE ALELRRDPVR STLALMGTVI LMLIMGYGIS MDVENLRFAV LDRDQTVSSQ
AWTLNLSGSR YFIEQPPLTS YDELDRRMRA GDITVAIEIP PNFGRDIARG TPVELGVWID
GAMPSRAETV KGYVQAMHQS WLQDVASRQS TPASQSGLMN IETRYRYNPD VKSLPAIVPA
VIPLLLMMIP SMLSALSVVR EKELGSIINL YVTPTTRSEF LLGKQLPYIA LGMLNFFLLC
GLSVFVFGVP HKGSFLTLTL AALLYIIIAT GMGLLISTFM KSQIAAIFGT AIITLIPATQ
FSGMIDPVAS LEGPGRWIGE VYPTSHFLTI ARGTFSKALD LTDLWQLFIP LLIAIPLVMG
LSILLLKKQE G