Gene EcDH1_0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0193 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp211869 
End bp212471 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionACX37887 
Protein GI260447465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.10245e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATAG TCATGTTTGA CAGGCAGTCA ATATTTATTC ATGGAATGAA AATCAGTTTA 
CAGCAGCGTA TTCCAGGAGT GAGTATTCAG GGGGCCAGTC AGGCAGACGA GTTATGGCAA
AAGCTGGAAA GTTACCCTGA AGCCTTAGTT ATGCTCGATG GCGATCAGGA TGGTGAGTTT
TGCTACTGGT TGCTGCAAAA AACCGTGGTG CAATTTCCTG AGGTTAAGGT GTTAATTACG
GCGACGGATT GCAATAAACG GTGGTTACAG GAAGTTATCC ATTTTAATGT GCTGGCCATT
GTGCCTCGTG ATTCAACCGT CGAGACATTT GCGTTGGCGG TAAATAGTGC GGCGATGGGG
ATGATGTTTC TGCCTGGAGA CTGGCGGACG ACGCCGGAAA AGGACATTAA AGATCTCAAA
TCGTTAAGCG CCCGCCAGCG GGAGATTTTA ACCATGTTAG CGGCGGGCGA ATCAAATAAG
GAGATCGGCA GAGCGCTGAA TATCAGTACC GGAACGGTAA AAGCGCATCT GGAATCCCTG
TATCGCCGTC TGGAAGTGAA AAATCGCACC CAGGCGGCAA TGATGTTAAA TATCTCCTCC
TGA
 
Protein sequence
MQIVMFDRQS IFIHGMKISL QQRIPGVSIQ GASQADELWQ KLESYPEALV MLDGDQDGEF 
CYWLLQKTVV QFPEVKVLIT ATDCNKRWLQ EVIHFNVLAI VPRDSTVETF ALAVNSAAMG
MMFLPGDWRT TPEKDIKDLK SLSARQREIL TMLAAGESNK EIGRALNIST GTVKAHLESL
YRRLEVKNRT QAAMMLNISS