Gene EcDH1_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0133 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp138962 
End bp139435 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID 
ProductTripartite ATP-independent periplasmic transporter DctQ component 
Protein accessionACX37827 
Protein GI260447405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACTCGAAGC AATACTGGCG ATTAATCTCG CCGTACTTTC CTGTATTGTA 
TTTATAAACA TTATTTTAAG ATATGGTTTT CAGACAAGCA TTTTATCTGT TGATGAATTG
TCACGTTATT TATTTGTCTG GTTAACGTTT ATTGGCGCGA TTGTAGCTTT TATGGATAAC
GCCCACGTTC AGGTCACCTT TCTGGTGGAG AAACTCTCCC CCGCATGGCA GCGACGAGTC
GCTCTGGTTA CCCATTCCTT AATCTTATTT ATTTGTGGCG CACTGGCCTG GGGCGCAACG
CTAAAAACAA TTCAGGACTG GAGCGATTAT TCACCGATCC TCGGTTTACC CATCGGCCTG
ATGTATGCCG CTTGTCTGCC CACCAGCCTC GTTATCGCAT TCTTTGAACT GCGTCATTTA
TATCAACTCA TCACGCGTAG CAATTCTCTA ACGTCGCCAC CGCAAGGAGC TTAA
 
Protein sequence
MKKILEAILA INLAVLSCIV FINIILRYGF QTSILSVDEL SRYLFVWLTF IGAIVAFMDN 
AHVQVTFLVE KLSPAWQRRV ALVTHSLILF ICGALAWGAT LKTIQDWSDY SPILGLPIGL
MYAACLPTSL VIAFFELRHL YQLITRSNSL TSPPQGA