Gene EcDH1_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0102 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp104709 
End bp106364 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content55% 
IMG OID 
ProductL-lactate transport 
Protein accessionACX37800 
Protein GI260447378 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTCT GGCAACAAAA CTACGATCCC GCCGGGAATA TCTGGCTTTC CAGTCTGATA 
GCATCGCTTC CCATCCTGTT TTTCTTCTTT GCGCTGATTA AGCTCAAACT GAAAGGATAC
GTCGCCGCCT CGTGGACGGT GGCAATCGCC CTTGCCGTGG CTTTGCTGTT CTATAAAATG
CCGGTCGCTA ACGCGCTGGC CTCGGTGGTT TATGGTTTCT TCTACGGGTT GTGGCCCATC
GCGTGGATCA TTATTGCAGC GGTGTTCGTC TATAAGATCT CGGTGAAAAC CGGGCAGTTT
GACATCATTC GCTCGTCTAT TCTTTCGATA ACCCCTGACC AGCGTCTGCA AATGCTGATC
GTCGGTTTCT GTTTCGGCGC GTTCCTTGAA GGAGCCGCAG GCTTTGGCGC ACCGGTAGCA
ATTACCGCCG CATTGCTGGT CGGCCTGGGT TTTAAACCGC TGTACGCCGC CGGGCTGTGC
CTGATTGTTA ACACCGCGCC AGTGGCATTT GGTGCGATGG GCATTCCAAT CCTGGTTGCC
GGACAGGTAA CAGGTATCGA CAGCTTTGAG ATTGGTCAGA TGGTGGGGCG GCAGCTACCG
TTTATGACCA TTATCGTGCT GTTCTGGATC ATGGCGATTA TGGACGGCTG GCGCGGTATC
AAAGAGACGT GGCCTGCGGT CGTGGTTGCG GGCGGCTCGT TTGCCATCGC TCAGTACCTT
AGCTCTAACT TCATTGGGCC GGAGCTGCCG GACATTATCT CTTCGCTGGT ATCACTGCTC
TGCCTGACGC TGTTCCTCAA ACGCTGGCAG CCAGTGCGTG TATTCCGTTT TGGTGATTTG
GGGGCGTCAC AGGTTGATAT GACGCTGGCC CACACCGGTT ACACTGCGGG TCAGGTGTTA
CGTGCCTGGA CACCGTTCCT GTTCCTGACA GCTACCGTAA CACTGTGGAG TATCCCGCCG
TTTAAAGCCC TGTTCGCATC GGGTGGCGCG CTGTATGAGT GGGTGATCAA TATTCCGGTG
CCGTACCTCG ATAAACTGGT TGCCCGTATG CCGCCAGTGG TCAGCGAGGC TACAGCCTAT
GCCGCCGTGT TTAAGTTTGA CTGGTTCTCT GCCACCGGCA CCGCCATTCT GTTTGCTGCA
CTGCTCTCGA TTGTCTGGCT GAAGATGAAA CCGTCTGACG CTATCAGCAC CTTCGGCAGC
ACGCTGAAAG AACTGGCTCT GCCCATCTAC TCCATCGGTA TGGTGCTGGC ATTCGCCTTT
ATTTCGAACT ATTCCGGACT GTCATCAACA CTGGCGCTGG CACTGGCGCA CACCGGTCAT
GCATTCACCT TCTTCTCGCC GTTCCTCGGC TGGCTGGGGG TATTCCTGAC CGGGTCGGAT
ACCTCATCTA ACGCCCTGTT CGCCGCGCTG CAAGCCACCG CAGCACAACA AATTGGCGTC
TCTGATCTGT TGCTGGTTGC CGCCAATACC ACCGGTGGCG TCACCGGTAA GATGATCTCC
CCGCAATCTA TCGCTATCGC CTGTGCGGCG GTAGGCCTGG TGGGCAAAGA GTCTGATTTG
TTCCGCTTTA CTGTCAAACA CAGCCTGATC TTCACCTGTA TAGTGGGCGT GATCACCACG
CTTCAGGCTT ATGTCTTAAC GTGGATGATT CCTTAA
 
Protein sequence
MNLWQQNYDP AGNIWLSSLI ASLPILFFFF ALIKLKLKGY VAASWTVAIA LAVALLFYKM 
PVANALASVV YGFFYGLWPI AWIIIAAVFV YKISVKTGQF DIIRSSILSI TPDQRLQMLI
VGFCFGAFLE GAAGFGAPVA ITAALLVGLG FKPLYAAGLC LIVNTAPVAF GAMGIPILVA
GQVTGIDSFE IGQMVGRQLP FMTIIVLFWI MAIMDGWRGI KETWPAVVVA GGSFAIAQYL
SSNFIGPELP DIISSLVSLL CLTLFLKRWQ PVRVFRFGDL GASQVDMTLA HTGYTAGQVL
RAWTPFLFLT ATVTLWSIPP FKALFASGGA LYEWVINIPV PYLDKLVARM PPVVSEATAY
AAVFKFDWFS ATGTAILFAA LLSIVWLKMK PSDAISTFGS TLKELALPIY SIGMVLAFAF
ISNYSGLSST LALALAHTGH AFTFFSPFLG WLGVFLTGSD TSSNALFAAL QATAAQQIGV
SDLLLVAANT TGGVTGKMIS PQSIAIACAA VGLVGKESDL FRFTVKHSLI FTCIVGVITT
LQAYVLTWMI P