Gene EcDH1_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0087 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp90065 
End bp90937 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content37% 
IMG OID 
Productconserved hypothetical protein 
Protein accessionACX37785 
Protein GI260447363 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00389422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTAT TAGTAATGAA ATCATCCACC ACAATTATCA CTGCATATTT TGACATTGGT 
AGAGGGGATT GGACTGCTAA TAAAGGGTTC CGTGAAAAAC TAGCTCGTTC AGTTGATGTT
TATTTTAGTT ACTTTGAGCG TCTGGCCGCA CTTGAAAATG AGATGATTAT TTTCACTTCT
CCCGATTTGA AACCAAGGGT TGAAGCGATT CGCAACGGAA AACCAACAAC GGTTATCGTT
ATCGATATAA AAAAGAAATT TAGATATATC AGAAGTCGTA TCGAAAAAAT TCAAAAAGAT
GAGTCGTTTA CAAATAGACT TGAGCCTCGA CAATTAAAAA ACCCAGAGTA CTGGTCACCA
GAGTATGTTT TGGTATGTAA CCTTAAGGCC TATTTTGTAA ATAAAGCTAT CAACATGGGC
TTAGTGAAAA CGCCTCTTGT TGCGTGGATA GATTTTGGCT ATTGCCATAA GCCAAATGTA
ACTCGAGGAT TGAAAATTTG GGATTTCCCA TTTGATGAAA GTAAGATGCA TCTTTTCACT
ATAAAAAAAG GGCTTACTGT CACATCTCAA CAACAGGTTT TTGATTTCAT GATTGGCAAT
CATGTATATA TTATTGGGGG CGCAATTGTT GGTTCACAGC ATAAATGGAA AGAATTCTAT
AAATTAGTTC TGGAAAGTCA AAAAATAACA CTAAATAATA ACATTGTGGA CGATGACCAG
GGCATTTTTG TCATGTGCTA TTACAAACGC CCCGATCTCT TCAACCTAAA CTATCTGGGG
AGAGGAAAAT GGTTCGATTT GTTTCGCTGC TTCAGGAGTA ACACTTTAGG GGCAAAAATG
CAGGCGCTGA GAATTTTCCT TTCAAGAAAA TAG
 
Protein sequence
MVLLVMKSST TIITAYFDIG RGDWTANKGF REKLARSVDV YFSYFERLAA LENEMIIFTS 
PDLKPRVEAI RNGKPTTVIV IDIKKKFRYI RSRIEKIQKD ESFTNRLEPR QLKNPEYWSP
EYVLVCNLKA YFVNKAINMG LVKTPLVAWI DFGYCHKPNV TRGLKIWDFP FDESKMHLFT
IKKGLTVTSQ QQVFDFMIGN HVYIIGGAIV GSQHKWKEFY KLVLESQKIT LNNNIVDDDQ
GIFVMCYYKR PDLFNLNYLG RGKWFDLFRC FRSNTLGAKM QALRIFLSRK