Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_0087 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 90065 |
End bp | 90937 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | conserved hypothetical protein |
Protein accession | ACX37785 |
Protein GI | 260447363 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00389422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCTTAT TAGTAATGAA ATCATCCACC ACAATTATCA CTGCATATTT TGACATTGGT AGAGGGGATT GGACTGCTAA TAAAGGGTTC CGTGAAAAAC TAGCTCGTTC AGTTGATGTT TATTTTAGTT ACTTTGAGCG TCTGGCCGCA CTTGAAAATG AGATGATTAT TTTCACTTCT CCCGATTTGA AACCAAGGGT TGAAGCGATT CGCAACGGAA AACCAACAAC GGTTATCGTT ATCGATATAA AAAAGAAATT TAGATATATC AGAAGTCGTA TCGAAAAAAT TCAAAAAGAT GAGTCGTTTA CAAATAGACT TGAGCCTCGA CAATTAAAAA ACCCAGAGTA CTGGTCACCA GAGTATGTTT TGGTATGTAA CCTTAAGGCC TATTTTGTAA ATAAAGCTAT CAACATGGGC TTAGTGAAAA CGCCTCTTGT TGCGTGGATA GATTTTGGCT ATTGCCATAA GCCAAATGTA ACTCGAGGAT TGAAAATTTG GGATTTCCCA TTTGATGAAA GTAAGATGCA TCTTTTCACT ATAAAAAAAG GGCTTACTGT CACATCTCAA CAACAGGTTT TTGATTTCAT GATTGGCAAT CATGTATATA TTATTGGGGG CGCAATTGTT GGTTCACAGC ATAAATGGAA AGAATTCTAT AAATTAGTTC TGGAAAGTCA AAAAATAACA CTAAATAATA ACATTGTGGA CGATGACCAG GGCATTTTTG TCATGTGCTA TTACAAACGC CCCGATCTCT TCAACCTAAA CTATCTGGGG AGAGGAAAAT GGTTCGATTT GTTTCGCTGC TTCAGGAGTA ACACTTTAGG GGCAAAAATG CAGGCGCTGA GAATTTTCCT TTCAAGAAAA TAG
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Protein sequence | MVLLVMKSST TIITAYFDIG RGDWTANKGF REKLARSVDV YFSYFERLAA LENEMIIFTS PDLKPRVEAI RNGKPTTVIV IDIKKKFRYI RSRIEKIQKD ESFTNRLEPR QLKNPEYWSP EYVLVCNLKA YFVNKAINMG LVKTPLVAWI DFGYCHKPNV TRGLKIWDFP FDESKMHLFT IKKGLTVTSQ QQVFDFMIGN HVYIIGGAIV GSQHKWKEFY KLVLESQKIT LNNNIVDDDQ GIFVMCYYKR PDLFNLNYLG RGKWFDLFRC FRSNTLGAKM QALRIFLSRK
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