Gene EcDH1_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0085 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp87788 
End bp88834 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID 
Productlipopolysaccharide heptosyltransferase II 
Protein accessionACX37783 
Protein GI260447361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value3.8978e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TGGTGATCGG CCCGTCTTGG GTTGGCGACA TGATGATGTC GCAAAGTCTC 
TATCGCACGC TCCAGGCGCG CTATCCCCAG GCGATAATCG ATGTGATGGC ACCGGCATGG
TGCCGTCCAT TATTATCGCG GATGCCGGAA GTTAACGAAG CTATTCCTAT GCCTCTCGGT
CACGGAGCGC TGGAAATCGG CGAACGCCGC AAACTGGGTC ATAGCCTGCG TGAAAAGCGC
TACGACCGCG CCTACGTCTT ACCCAACTCC TTCAAATCTG CATTAGTGCC TTTCTTCGCG
GGTATTCCTC ATCGCACCGG CTGGCGCGGC GAGATGCGCT ACGGTTTACT CAACGATGTA
CGCGTGCTCG ATAAAGAAGC CTGGCCGCTA ATGGTGGAAC GCTATATAGC GCTGGCCTAT
GACAAAGGCA TTATGCGCAC AGCACAAGAT CTGCCGCAGC CATTGTTATG GCCGCAGTTG
CAGGTGAGCG AAGGTGAAAA ATCATATACC TGTAATCAAT TTTCGCTTTC ATCAGAACGT
CCGATGATTG GTTTTTGCCC GGGTGCGGAG TTTGGTCCGG CAAAACGCTG GCCACACTAC
CACTATGCGG AGCTGGCAAA GCAGCTGATT GATGAAGGTT ATCAGGTGGT TCTGTTTGGC
TCGGCGAAAG ATCATGAAGC GGGCAATGAG ATTCTTGCCG CTTTGAATAC CGAGCAGCAG
GCATGGTGTC GGAACCTGGC GGGGGAAACA CAGCTTGATC AAGCGGTTAT CCTGATTGCA
GCCTGTAAAG CCATTGTCAC TAACGATTCT GGCCTGATGC ATGTTGCGGC GGCGCTCAAT
CGTCCGCTGG TTGCCCTGTA TGGTCCGAGT AGCCCGGACT TCACACCGCC GCTATCCCAT
AAAGCGCGCG TGATCCGTTT GATTACCGGC TATCACAAAG TGCGTAAAGG TGACGCTGCG
GAGGGTTATC ACCAGAGCTT AATCGACATT ACTCCCCAGC GCGTACTGGA AGAACTCAAC
GCGCTATTGT TACAAGAGGA AGCCTGA
 
Protein sequence
MKILVIGPSW VGDMMMSQSL YRTLQARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG 
HGALEIGERR KLGHSLREKR YDRAYVLPNS FKSALVPFFA GIPHRTGWRG EMRYGLLNDV
RVLDKEAWPL MVERYIALAY DKGIMRTAQD LPQPLLWPQL QVSEGEKSYT CNQFSLSSER
PMIGFCPGAE FGPAKRWPHY HYAELAKQLI DEGYQVVLFG SAKDHEAGNE ILAALNTEQQ
AWCRNLAGET QLDQAVILIA ACKAIVTNDS GLMHVAAALN RPLVALYGPS SPDFTPPLSH
KARVIRLITG YHKVRKGDAA EGYHQSLIDI TPQRVLEELN ALLLQEEA