| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0077 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 79626 |
|---|
| End bp | 80705 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | ACX37775 |
|---|
| Protein GI | 260447353 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG CGTTTATCGG CGAAGCTGTT TCTGGATTTG GCGGCATGGA AACTGTCATC
CGTGATGTTA TTACTACCTT CAGGCAACAA CATATCCAAA GTGAAATGTT TTTCTTTTGT
CGTAATGACA AAATGGATAA GGGATGGCTG GAAGGTATTA AATACTCATG TTCATTTTCC
AATATTCGTT TAGGTTTTTT GCGTCGGGCG AAACATATTC ATGCTCTAAG TAAATGGCTT
CAGGAGTACC AACCAGATAT CGTTATTTGT ATTGATGTGA TCTCCTGCCT GTTTGCCGCA
AAAGCACGTA AAAAATCAGG AATTGATATG CCAGTATTTT CATGGCCACA TTTTTCTTTA
GATCACAAAA AACATGCTGA ATATATCACC TGTGCCGACT ATCATTTAGC AATCAGCTCT
GGCATTAAAC AGCAAATGAT TAATCGAGGT GTAGCAGAAT CGACGATAAA TGTTATTTTT
AATCCCGTCG AAACTAAAGA CTCAGTCATT CCCGCGCCCG AGGAAGGTGA AACGGCAACG
TTTATTTATG TTGGGCGTAT GAAATTTGAA GGCCAGAAAA GAGTTAAAGA CCTGCTTGAT
GGCTTATCAC AAGCGAAAGG TAACTGGAAA CTCCATGTAT TGGGTGATGG CTCCGATTTC
GAAAAATGCC AGGCTTATGG TAGAGAATTA AATATTGATG ATCGAATTGT CTGGTATGGT
TGGCAACAAT ATCCCTGGGA ATTGGTCCAG CAAGATATTG AAAAAGTGAG TGCGTTATTG
CTCACGTCAT CTTTTGAAGG TTTCCCAATG ACCCTACTTG AAGCCTTGTC GTGGGGGATT
CCTTGTATCA GTGCCGATTG TGTCTCCGGG CCTGCTGACA TTATTCAACC TGATGTCAAT
GGCCATCTGT ATCAACCGGG AGATATTGCT GGTTTTGTAA CTCTTCTAAA TAAATATATA
GCAGGTGAAA TTCATATCGA ACATGAAAAA ATTCCTGCGT CGATCGATGA ATTTTACCAA
TCGAAGTATT ACGATAGATT ACATAAGGTA ATTATTTCTG CTATTTCCCG GAGGAAATAA
|
|---|
| Protein sequence | MKIAFIGEAV SGFGGMETVI RDVITTFRQQ HIQSEMFFFC RNDKMDKGWL EGIKYSCSFS
NIRLGFLRRA KHIHALSKWL QEYQPDIVIC IDVISCLFAA KARKKSGIDM PVFSWPHFSL
DHKKHAEYIT CADYHLAISS GIKQQMINRG VAESTINVIF NPVETKDSVI PAPEEGETAT
FIYVGRMKFE GQKRVKDLLD GLSQAKGNWK LHVLGDGSDF EKCQAYGREL NIDDRIVWYG
WQQYPWELVQ QDIEKVSALL LTSSFEGFPM TLLEALSWGI PCISADCVSG PADIIQPDVN
GHLYQPGDIA GFVTLLNKYI AGEIHIEHEK IPASIDEFYQ SKYYDRLHKV IISAISRRK
|
|---|
| |