| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_0064 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 68673 |
|---|
| End bp | 69269 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | ACX37762 |
|---|
| Protein GI | 260447340 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00000175826 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA AACAAACTGC GAAAAGGAAC CGTCGCGAGG AAATACTTCA GTCTCTGGCG
CTGATGCTGG AATCCAGCGA TGGAAGCCAA CGTATCACGA CGGCAAAACT GGCCGCCTCT
GTCGGCGTTT CCGAAGCGGC ACTGTATCGC CACTTCCCCA GTAAGACCCG CATGTTCGAT
AGCCTGATTG AGTTTATCGA AGATAGCCTG ATTACTCGCA TCAACCTGAT TCTGAAAGAT
GAGAAAGACA CCACAGCGCG CCTGCGTCTG ATTGTGTTGC TGCTTCTCGG TTTTGGTGAG
CGTAATCCTG GCCTGACCCG CATCCTCACT GGTCATGCGC TAATGTTTGA ACAGGATCGC
CTGCAAGGGC GCATCAACCA GCTGTTCGAG CGTATTGAAG CGCAGCTGCG CCAGGTATTG
CGTGAAAAGA GAATGCGTGA GGGTGAAGGT TACACCACCG ATGAAACCCT GCTGGCAAGC
CAGATCCTGG CCTTCTGTGA AGGTATGCTG TCACGTTTTG TCCGCAGCGA ATTTAAATAC
CGCCCGACGG ATGATTTTGA CGCCCGCTGG CCGCTAATTG CGGCACAGTT GCAGTAA
|
|---|
| Protein sequence | MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD
SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR
LQGRINQLFE RIEAQLRQVL REKRMREGEG YTTDETLLAS QILAFCEGML SRFVRSEFKY
RPTDDFDARW PLIAAQLQ
|
|---|
| |