Gene EcDH1_0020 details

Gene Information

• Locus tag: EcDH1_0020
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: -
• Start bp: 19147
• End bp: 19863
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 51%
• Product: transcriptional regulator, GntR family
• Protein accession: ACX37720
• Protein GI: 260447298

Plasmid Coverage information

• Num covering plasmid clones: 68
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCTACA AAAGCATTGC GGAGCGGTTA AGAATTCGAC TTAACTCCGC AGATTTCACG 
CTAAACAGCC TTCTTCCCGG TGAAAAAAAG CTGGCGGAAG AGTTTGCGGT ATCGCGGATG 
ACCATCCGTA AAGCCATTGA CCTGCTGGTA GCGTGGGGGC TGGTGGTCCG CCGCCACGGT 
AGTGGCACTT ACCTGGTGCG CAAAGATGTA CTGCATCAAA CCGCCAGTCT GACCGGGCTG 
GTGGAGGTGT TAAAACGGCA GGGAAAAACG GTCACCAGCC AGGTGCTGAT TTTTGAAATC 
ATGCCTGCGC CTCCGGCCAT TGCCAGCCAG TTACGGATTC AAATCAACGA GCAGATCTAC 
TTCTCCCGTC GCGTTCGTTT TGTGGAAGGG AAACCGCTGA TGCTGGAAGA CAGCTATATG 
CCGGTAAAAC TGTTCCGTAA TCTTTCGCTG CAACATCTGG AAGGGTCGAA GTTTGAATAT 
ATTGAACAAG AGTGCGGGAT TTTGATTGGC GGTAATTATG AAAGCCTGAC GCCAGTGCTC 
GCCGATAGAC TGCTGGCGCG GCAAATGAAG GTAGCGGAAC ACACGCCACT GCTGCGGATC 
ACCTCGTTGT CATATAGCGA GAGCGGGGAG TTTTTGAATT ATTCAGTGAT GTTCAGAAAT 
GCCAGCGAAT ACCAGGTGGA GTACCATTTA CGGCGACTCC ACCCGGAAAA GAGTTAA 

 

Protein sequence

MIYKSIAERL RIRLNSADFT LNSLLPGEKK LAEEFAVSRM TIRKAIDLLV AWGLVVRRHG 
SGTYLVRKDV LHQTASLTGL VEVLKRQGKT VTSQVLIFEI MPAPPAIASQ LRIQINEQIY 
FSRRVRFVEG KPLMLEDSYM PVKLFRNLSL QHLEGSKFEY IEQECGILIG GNYESLTPVL 
ADRLLARQMK VAEHTPLLRI TSLSYSESGE FLNYSVMFRN ASEYQVEYHL RRLHPEKS