Gene EcDH1_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0001 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp33 
End bp1436 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content54% 
IMG OID 
Productchromosomal replication initiator protein DnaA 
Protein accessionACX37702 
Protein GI260447280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1.36922e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACTTT CGCTTTGGCA GCAGTGTCTT GCCCGATTGC AGGATGAGTT ACCAGCCACA 
GAATTCAGTA TGTGGATACG CCCATTGCAG GCGGAACTGA GCGATAACAC GCTGGCCCTG
TACGCGCCAA ACCGTTTTGT CCTCGATTGG GTACGGGACA AGTACCTTAA TAATATCAAT
GGACTGCTAA CCAGTTTCTG CGGAGCGGAT GCCCCACAGC TGCGTTTTGA AGTCGGCACC
AAACCGGTGA CGCAAACGCC ACAAGCGGCA GTGACGAGCA ACGTCGCGGC CCCTGCACAG
GTGGCGCAAA CGCAGCCGCA ACGTGCTGCG CCTTCTACGC GCTCAGGTTG GGATAACGTC
CCGGCCCCGG CAGAACCGAC CTATCGTTCT AACGTAAACG TCAAACACAC GTTTGATAAC
TTCGTTGAAG GTAAATCTAA CCAACTGGCG CGCGCGGCGG CTCGCCAGGT GGCGGATAAC
CCTGGCGGTG CCTATAACCC GTTGTTCCTT TATGGCGGCA CGGGTCTGGG TAAAACTCAC
CTGCTGCATG CGGTGGGTAA CGGCATTATG GCGCGCAAGC CGAATGCCAA AGTGGTTTAT
ATGCACTCCG AGCGCTTTGT TCAGGACATG GTTAAAGCCC TGCAAAACAA CGCGATCGAA
GAGTTTAAAC GCTACTACCG TTCCGTAGAT GCACTGCTGA TCGACGATAT TCAGTTTTTT
GCTAATAAAG AACGATCTCA GGAAGAGTTT TTCCACACCT TCAACGCCCT GCTGGAAGGT
AATCAACAGA TCATTCTCAC CTCGGATCGC TATCCGAAAG AGATCAACGG CGTTGAGGAT
CGTTTGAAAT CCCGCTTCGG TTGGGGACTG ACTGTGGCGA TCGAACCGCC AGAGCTGGAA
ACCCGTGTGG CGATCCTGAT GAAAAAGGCC GACGAAAACG ACATTCGTTT GCCGGGCGAA
GTGGCGTTCT TTATCGCCAA GCGTCTACGA TCTAACGTAC GTGAGCTGGA AGGGGCGCTG
AACCGCGTCA TTGCCAATGC CAACTTTACC GGACGGGCGA TCACCATCGA CTTCGTGCGT
GAGGCGCTGC GCGACTTGCT GGCATTGCAG GAAAAACTGG TCACCATCGA CAATATTCAG
AAGACGGTGG CGGAGTACTA CAAGATCAAA GTCGCGGATC TCCTTTCCAA GCGTCGATCC
CGCTCGGTGG CGCGTCCGCG CCAGATGGCG ATGGCGCTGG CGAAAGAGCT GACTAACCAC
AGTCTGCCGG AGATTGGCGA TGCGTTTGGT GGCCGTGACC ACACGACGGT GCTTCATGCC
TGCCGTAAGA TCGAGCAGTT GCGTGAAGAG AGCCACGATA TCAAAGAAGA TTTTTCAAAT
TTAATCAGAA CATTGTCATC GTAA
 
Protein sequence
MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN 
GLLTSFCGAD APQLRFEVGT KPVTQTPQAA VTSNVAAPAQ VAQTQPQRAA PSTRSGWDNV
PAPAEPTYRS NVNVKHTFDN FVEGKSNQLA RAAARQVADN PGGAYNPLFL YGGTGLGKTH
LLHAVGNGIM ARKPNAKVVY MHSERFVQDM VKALQNNAIE EFKRYYRSVD ALLIDDIQFF
ANKERSQEEF FHTFNALLEG NQQIILTSDR YPKEINGVED RLKSRFGWGL TVAIEPPELE
TRVAILMKKA DENDIRLPGE VAFFIAKRLR SNVRELEGAL NRVIANANFT GRAITIDFVR
EALRDLLALQ EKLVTIDNIQ KTVAEYYKIK VADLLSKRRS RSVARPRQMA MALAKELTNH
SLPEIGDAFG GRDHTTVLHA CRKIEQLREE SHDIKEDFSN LIRTLSS