Gene ECD_04242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_04242 
SymbolyjjQ 
ID0 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand+ 
Start bp4521852 
End bp4522577 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content45% 
IMG OID 
Productpredicted DNA-binding transcriptional regulator 
Protein accessionACT46022 
Protein GI253980352 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00962372 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCCAG GATGCTGCAA AAATGGAATT GTTATCAGTA AAATACCTGT TATGCAAGCA 
GGGTTAAAAG AGGTCATGAG GACTCACTTC CCTGAATATG AAATAATATC CAGCGCCTCT 
GCGGAGGACC TTACCTTATT ACAATTACGT CGTTCCGGAT TAGTCATTGC TGATTTAGCC 
GGTGAAAGTG AAGATCCACG TTCTGTTTGT GAACATTATT ATTCTTTAAT CTCACAATAT 
CGGGAAATTC ACTGGGTTTT CATGGTGTCA CGCTCCTGGT ATTCCCAGGC AGTAGAACTG 
CTCATGTGCC CTACGGCGAC GTTATTGTCT GATGTTGAAC CCATTGAGAA TCTGGTCAAG 
ACCGTACGTT CCGGCAATAC GCACGCAGAG CGTATCAGCG CCATGCTGAC CTCCCCGGCA 
ATGACTGAAA CTCATGATTT TAGCTATCGC TCCGTCATTC TCACTCTTTC AGAGCGCAAG 
GTACTGCGGC TATTAGGTAA AGGATGGGGC ATCAACCAGA TAGCTTCATT GCTTAAGAAA 
AGTAATAAAA CTATCAGCGC CCAAAAAAAC AGTGCGATGC GTCGACTGGC AATTCACAGC 
AACGCTGAAA TGTATGCATG GATAAATAGC GCGCAGGGTG CAAGAGAACT TAACTTGCCT 
TCTGTTTATG GAGATGCCGC AGAATGGAAC ACAGCCGAAT TAAGAAGAGA AATGTCGCAC 
TCATAG
 
Protein sequence
MLPGCCKNGI VISKIPVMQA GLKEVMRTHF PEYEIISSAS AEDLTLLQLR RSGLVIADLA 
GESEDPRSVC EHYYSLISQY REIHWVFMVS RSWYSQAVEL LMCPTATLLS DVEPIENLVK 
TVRSGNTHAE RISAMLTSPA MTETHDFSYR SVILTLSERK VLRLLGKGWG INQIASLLKK 
SNKTISAQKN SAMRRLAIHS NAEMYAWINS AQGARELNLP SVYGDAAEWN TAELRREMSH 
S