| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_03542 |
|---|
| Symbol | yicK |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 3725320 |
|---|
| End bp | 3726504 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted sugar efflux system |
|---|
| Protein accession | ACT45338 |
|---|
| Protein GI | 253979668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA CGGCTACCAC TCCATCAAAA ATACTTGATC TCACTGCCGC GGCATTTTTA
CTTGTCGCCT TTCTGACGGG TATTGCGGGC GCTCTTCAGA CTCCTACCCT AAGTATATTC
CTCGCAGATG AACTGAAAGC CCGTCCTATA ATGGTAGGTT TTTTCTTCAC CGGTAGCGCT
ATTATGGGAA TTCTGGTCAG TCAATTTCTG GCAAGGCACT CCGATAAACA AGGCGACCGT
AAATTACTGA TTCTGCTATG TTGCTTATTT GGAGTGCTGG CCTGCACGCT TTTTGCGTGG
AATCGCAACT ACTTCATTCT CCTCTCAACG GGCGTACTTC TGAGTAGTTT TGCTTCCACC
GCAAACCCGC AAATGTTCGC CCTCGCCCGT GAACACGCCG ACAGAACAGG CCGTGAGACG
GTCATGTTCA GTACATTTTT ACGTGCTCAG ATCTCGCTTG CCTGGGTTAT CGGGCCACCG
CTCGCTTATG AACTGGCAAT GGGATTTAGT TTTAAAGTGA TGTATCTCAC CGCTGCCATC
GCATTTGTTG TTTGCGGACT GATAGTCTGG TTGTTTTTGC CATCAATACA AAGAAATATT
CCTGTCGTTA CCCAACCCGT AGAAATTTTA CCCTCCACCC ACAGGAAGCG GGATACGCGG
CTACTTTTTG TGGTCTGTTC AATGATGTGG GCGGCGAATA ATCTCTACAT GATAAATATG
CCGCTATTTA TTATTGATGA ACTGCATCTA ACCGATAAAC TGGCTGGGGA AATGATTGGT
ATCGCTGCCG GTCTGGAAAT TCCGATGATG TTAATCGCAG GCTATTACAT GAAACGTATT
GGCAAGCGAC TATTAATGCT CATTGCTATC GTGAGTGGAA TGTGTTTTTA CGCCAGCGTA
CTCATGGCGA CGACTCCGGC GGTTGAGCTG GAATTGCAAA TTCTTAATGC CATCTTCCTT
GGTATTCTCT GTGGTATCGG CATGCTTTAT TTTCAGGACT TGATGCCTGA AAAAATAGGC
TCTGCGACAA CGTTATATGC AAATACTTCA CGCGTCGGCT GGATTATCGC CGGCTCTGTT
GACGGAATTA TGGTTGAAAT CTGGAGCTAC CATGCGTTGT TCTGGCTGGC GATAGGGATG
TTGGGTATTG CGATGATTTG CCTGCTGTTT ATTAAAGATA TTTAG
|
|---|
| Protein sequence | MQKTATTPSK ILDLTAAAFL LVAFLTGIAG ALQTPTLSIF LADELKARPI MVGFFFTGSA
IMGILVSQFL ARHSDKQGDR KLLILLCCLF GVLACTLFAW NRNYFILLST GVLLSSFAST
ANPQMFALAR EHADRTGRET VMFSTFLRAQ ISLAWVIGPP LAYELAMGFS FKVMYLTAAI
AFVVCGLIVW LFLPSIQRNI PVVTQPVEIL PSTHRKRDTR LLFVVCSMMW AANNLYMINM
PLFIIDELHL TDKLAGEMIG IAAGLEIPMM LIAGYYMKRI GKRLLMLIAI VSGMCFYASV
LMATTPAVEL ELQILNAIFL GILCGIGMLY FQDLMPEKIG SATTLYANTS RVGWIIAGSV
DGIMVEIWSY HALFWLAIGM LGIAMICLLF IKDI
|
|---|
| |