Gene ECD_03133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03133 
SymbolyrdC 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp3292013 
End bp3292585 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content52% 
IMG OID 
Productpredicted ribosome maturation factor 
Protein accessionACT44937 
Protein GI253979267 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00993988 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAATA ACCTGCAAAG AGACGCTATC GCAGCTGCGA TAGATGTTCT CAATGAAGAA 
CGTGTCATCG CCTATCCAAC GGAAGCCGTT TTCGGTGTTG GGTGCGATCC TGATAGCGAA
ACAGCAGTGA TGCGACTGTT GGAGTTAAAA CAGCGTCCGG TTGATAAGGG GCTGATTTTA
ATCGCAGCAA ATTACGAGCA GCTTAAACCC TATATTGATG ACACCATGTT GACTGACGTG
CAGCGTGAAA CCATTTTTTC CCGCTGGCCA GGTCCTGTCA CCTTTGTCTT TCCCGCGCCT
GCGACAACAC CGCGCTGGTT GACGGGCCGC TTTGATTCGC TTGCTGTACG AGTCACCGAC
CATCCGTTGG TGGTTGCTTT GTGCCAGGCT TATGGTAAAC CGCTGGTTTC TACCAGTGCC
AACTTGAGTG GATTGCCACC TTGTCGAACA GTAGACGAAG TTCGCGCACA ATTTGGCGCG
GCGTTCCCGG TTGTGCCTGG TGAAACGGGG GGGCGTTTAA ATCCTTCAGA AATCCGCGAT
GCCCTGACGG GTGAACTGTT TCGACAGGGG TAA
 
Protein sequence
MNNNLQRDAI AAAIDVLNEE RVIAYPTEAV FGVGCDPDSE TAVMRLLELK QRPVDKGLIL 
IAANYEQLKP YIDDTMLTDV QRETIFSRWP GPVTFVFPAP ATTPRWLTGR FDSLAVRVTD
HPLVVALCQA YGKPLVSTSA NLSGLPPCRT VDEVRAQFGA AFPVVPGETG GRLNPSEIRD
ALTGELFRQG