Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03133 |
Symbol | yrdC |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 3292013 |
End bp | 3292585 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | predicted ribosome maturation factor |
Protein accession | ACT44937 |
Protein GI | 253979267 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00993988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAATA ACCTGCAAAG AGACGCTATC GCAGCTGCGA TAGATGTTCT CAATGAAGAA CGTGTCATCG CCTATCCAAC GGAAGCCGTT TTCGGTGTTG GGTGCGATCC TGATAGCGAA ACAGCAGTGA TGCGACTGTT GGAGTTAAAA CAGCGTCCGG TTGATAAGGG GCTGATTTTA ATCGCAGCAA ATTACGAGCA GCTTAAACCC TATATTGATG ACACCATGTT GACTGACGTG CAGCGTGAAA CCATTTTTTC CCGCTGGCCA GGTCCTGTCA CCTTTGTCTT TCCCGCGCCT GCGACAACAC CGCGCTGGTT GACGGGCCGC TTTGATTCGC TTGCTGTACG AGTCACCGAC CATCCGTTGG TGGTTGCTTT GTGCCAGGCT TATGGTAAAC CGCTGGTTTC TACCAGTGCC AACTTGAGTG GATTGCCACC TTGTCGAACA GTAGACGAAG TTCGCGCACA ATTTGGCGCG GCGTTCCCGG TTGTGCCTGG TGAAACGGGG GGGCGTTTAA ATCCTTCAGA AATCCGCGAT GCCCTGACGG GTGAACTGTT TCGACAGGGG TAA
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Protein sequence | MNNNLQRDAI AAAIDVLNEE RVIAYPTEAV FGVGCDPDSE TAVMRLLELK QRPVDKGLIL IAANYEQLKP YIDDTMLTDV QRETIFSRWP GPVTFVFPAP ATTPRWLTGR FDSLAVRVTD HPLVVALCQA YGKPLVSTSA NLSGLPPCRT VDEVRAQFGA AFPVVPGETG GRLNPSEIRD ALTGELFRQG
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