Gene ECD_03123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_03123 
SymbolacrE 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp3275020 
End bp3276177 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content52% 
IMG OID 
Productcytoplasmic membrane lipoprotein 
Protein accessionACT44927 
Protein GI253979257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC ATGCCAGGTT TTTCCTCCTG CCCTCCTTTA TTCTGATCTC CGCGGCTTTA 
ATCGCCGGTT GTAACGATAA GGGAGAAGAG AAAGCTCACG TCGGTGAACC GCAGGTTACC
GTTCATATTG TGAAAACGGC CCCGTTAGAA GTTAAGACTG AATTACCAGG CCGCACCAAT
GCTTACCGTA TAGCCGAAGT TCGCCCACAG GTTAGCGGGA TCGTACTGAA TCGTAATTTC
ACTGAAGGCA GCGATGTACA AGCAGGCCAG TCCCTGTACC AGATCGATCC CGCGACCTAT
CAGGCAAATT ATGACAGCGC GAAAGGCGAA CTGGCGAAAA GTGAAGCCGC CGCCGCCATC
GCGCATTTGA CGGTAAAACG TTACGTTCCG CTCGTGGGTA CGAAATACAT CAGCCAGCAG
GAGTACGACC AGGCCATTGC TGATGCTCGC CAGGCCGATG CCGCCGTGAT TGCCGCAAAA
GCCACAGTCG AAAGCGCTCG CATCAATCTC GCTTATACCA AAGTGACTGC GCCAATTAGC
GGACGTATCG GCAAATCGAC CGTGACCGAA GGCGCTCTTG TCACTAATGG GCAAACGACT
GAACTGGCGA CTGTCCAGCA GCTCGATCCT ATCTACGTTG ATGTGACCCA ATCCAGCAAC
GATTTTATGA GGCTGAAGCA ATCCGTAGAG CAAGGAAATT TGCATAAGGA AAACGCCACC
AGCAACGTAG AGTTGGTCAT GGAAAACGGT CAAACCTATC CCCTGAAAGG TACGCTGCAA
TTCTCTGATG TGACCGTTGA TGAAAGCACC GGCTCCATAA CCCTACGTGC TGTCTTCCCT
AACCCGCAAC ATACGCTTTT GCCGGGTATG TTTGTGCGTG CACGGATTGA TGAAGGCGTC
CAACCTGACG CCATTCTTAT CCCGCAACAA GGCGTTAGCC GCACACCGCG TGGTGATGCA
ACCGTGCTGA TTGTTAACGA TAAAAGTCAG GTGGAAGCGC GCCCTGTCGT TGCCAGTCAG
GCGATTGGCG ATAAATGGTT GATTAGCGAA GCTCTGAAAT CTGGCGATCA AGTCATTGTC
AGCGGCCTGC AAAAAGCGCG TCCGGGAGAG CAGGTTAAAG CCACTACCGA TACCCCCGCA
GATACTGCAT CGAAGTAA
 
Protein sequence
MTKHARFFLL PSFILISAAL IAGCNDKGEE KAHVGEPQVT VHIVKTAPLE VKTELPGRTN 
AYRIAEVRPQ VSGIVLNRNF TEGSDVQAGQ SLYQIDPATY QANYDSAKGE LAKSEAAAAI
AHLTVKRYVP LVGTKYISQQ EYDQAIADAR QADAAVIAAK ATVESARINL AYTKVTAPIS
GRIGKSTVTE GALVTNGQTT ELATVQQLDP IYVDVTQSSN DFMRLKQSVE QGNLHKENAT
SNVELVMENG QTYPLKGTLQ FSDVTVDEST GSITLRAVFP NPQHTLLPGM FVRARIDEGV
QPDAILIPQQ GVSRTPRGDA TVLIVNDKSQ VEARPVVASQ AIGDKWLISE ALKSGDQVIV
SGLQKARPGE QVKATTDTPA DTASK