Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_03002 |
Symbol | agaA |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 3148990 |
End bp | 3150123 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | N-acetylgalactosamine-6-phosphate deacetylase |
Protein accession | ACT44806 |
Protein GI | 253979136 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACACG TTCTGCGCGC CAGAAGGCTG CTGACTGAAG AGGGATGGCT CGATGACCAT CAGTTGCGTA TTGCTGACGG TGTCATCGCA GCAATCGAAC CGATTCCAGC GGGCGTGACT GAACGCGATG CGGAACTGCT CTGCCCTGCT TACATCGACA CCCATGTACA CGGTGGTGCG GGCGTTGATG TAATGGATGA CGCGCCGGAT GTACTCGACA AGCTGGCAAT GCACAAGGCA CGCGAAGGTG TCGGCAGTTG GTTACCGACC ACCGTAACCG CGCCGCTTAA TACCATTCAT GCGGCGCTGA AACGTATTGC TCAACGTTGC CAACGCGGCG GACCTGGTGC GCAAGTGCTG GGGAGTTATC TCGAAGGACC GTACTTCACG CCGCAGAATA AAGGCGCGCA TCCGCCGGAG TTGTTTCGCG AGCTTGAAAT TGCCGAGCTG GATCAGTTGA TTGCCGTTTC TCAGCACACC TTACGCGTGG TAGCGCTGGC ACCGGAAAAA GAGGGGGCAT TGCAGGCCAT CCGCCATCTT AAACAGCAAA ATGTACGAGT GATGCTGGGG CATAGCGCGG CGACCTGGCA ACAAACTCGC GCCGCGTTTG ATGCTGGTGC CGACGGCCTG GTGCATTGCT ATAACGGGAT GACAGGTTTA CATCACCGCG AACCGGGAAT GGTTGGCGCG GGATTAACGG ACAAGCGCGC CTGGCTGGAA CTGATAGCCG ATGGTCATCA TGTGCATCCG GCGGCGATGT CGCTGTGTTG TTGCTGTGCA AAAGAGAGAA TCGTGATGAT CACCGACGCG ATGCAGGCAG CCGGGATGCC GGATGGTCGC TATACGTTAT GTGGCGAAGA AGTGCAGATG CACGGTGGCG TTGTCCGTAC CGCGTCCGGT GGGCTGGCGG GCAGTACGCT GTCTGTTGAT GCGGCAGTGC GCAACATGGT CGAGTTGACG GGCGTAACGC CTGCGGAAGC CATTCATATG GCATCGCTGC ATCCGGCGCG AATGCTGGGT GTTGATGGTG TTCTGGGATC GCTTAAACCG GGCAAACGCG CCAGCATCGT TGCGCTGGAT AGCGGGCTGC ATGTGCAACA AATCTGGATT CAGAGTCAAT TAGCTTCGTT TTGA
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Protein sequence | MTHVLRARRL LTEEGWLDDH QLRIADGVIA AIEPIPAGVT ERDAELLCPA YIDTHVHGGA GVDVMDDAPD VLDKLAMHKA REGVGSWLPT TVTAPLNTIH AALKRIAQRC QRGGPGAQVL GSYLEGPYFT PQNKGAHPPE LFRELEIAEL DQLIAVSQHT LRVVALAPEK EGALQAIRHL KQQNVRVMLG HSAATWQQTR AAFDAGADGL VHCYNGMTGL HHREPGMVGA GLTDKRAWLE LIADGHHVHP AAMSLCCCCA KERIVMITDA MQAAGMPDGR YTLCGEEVQM HGGVVRTASG GLAGSTLSVD AAVRNMVELT GVTPAEAIHM ASLHPARMLG VDGVLGSLKP GKRASIVALD SGLHVQQIWI QSQLASF
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