Gene ECD_02836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_02836 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp2967565 
End bp2968788 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical type II secretion protein GspF 
Protein accessionACT44640 
Protein GI253978970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.56909e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTGT TTTACTATCA GGCGCTGGAG CGTAATGGTC GCAAAACCAA AGGCATGATT 
GAGGCGGATT CCGCGCGTCA TGCCCGTCAA TTGTTGCGTG GTAAAGACCT CATTCCCGTG
CACATTGAAG CCCGGATGAA TGCATCGGCA GGGGGGATGT TGCAGCGTCG GCGGCACGCA
CATCGTCGCG TGGCGGCGGC AGATCTGGCG CTGTTCACAC GCCAACTGGC AACATTAGTA
CAGGCAGCAA TGCCGCTGGA AACCTGCTTA CAGGCGGTCA GTGAGCAAAG TGAAAAACTG
CATGTAAAAA GCCTCGGAAT GGCGCTGCGC AGCCGGATTC AGGAAGGTTA CACCCTGTCG
GACAGCCTGC GCGAACATCC CCGCGTCTTT GATTCTCTGT TTTGTTCGAT GGTTGCTGCC
GGTGAAAAAT CCGGGCATCT CGACGTGGTG CTCAATCGCC TGGCGGATTA CACCGAACAG
CGACAGCGCC TGAAATCTCG CCTGCTGCAG GCCATGCTTT ATCCGCTGGT ATTGCTGGTG
GTGGCAACGG GCGTAGTCAC TATTTTGCTG ACGGCAGTGG TGCCGAAAAT CATCGAACAG
TTTGATCATC TCGGACACGC GCTGCCTGCC TCCACCCGCA CGCTCATCGC CATGAGCGAC
GCGTTACAGG CCAGCGGCGT GTACTGGCTG GCGGGTTTGC TGGGGCTTCT GGTGCTGGGG
CAACGGCTAC TCAAAAATCC TGCGATGCGC CTGCGCTGGG ATAAAACCTT GCTGCGTTTG
CCCGTGACGG GGCGTGTTGC GCGCGGACTG AATACGGCGC GTTTTTCCCG CACATTAAGC
ATCCTCACCG CCAGCAGTGT TCCGCTGCTG GAAGGCATTC AGACCGCCGC CGCCGTGTCG
GCAAATCGTT ATGTCGAACA ACAACTGCTG CTGGCGGCAG ATCGCGTCCG CGAAGGAAGC
AGTCTGCGCG CTGCGCTGGC GGAGTTGCGC CTGTTCCCGC CGATGATGCT GTACATGATC
GCCTCCGGCG AACAGAGCGG CGAACTGGAA ACCATGCTTG AGCAGGCCGC AGTCAACCAG
GAACGGGAAT TTGATACCCA GGTGGGGCTG GCGTTAGGGC TGTTTGAACC GGCGCTGGTG
GTGATGATGG CGGGCGTGGT GCTGTTTATC GTCATCGCCA TCCTCGAGCC GATGCTGCAA
CTGAACAATA TGGTTGGAAT GTAA
 
Protein sequence
MALFYYQALE RNGRKTKGMI EADSARHARQ LLRGKDLIPV HIEARMNASA GGMLQRRRHA 
HRRVAAADLA LFTRQLATLV QAAMPLETCL QAVSEQSEKL HVKSLGMALR SRIQEGYTLS
DSLREHPRVF DSLFCSMVAA GEKSGHLDVV LNRLADYTEQ RQRLKSRLLQ AMLYPLVLLV
VATGVVTILL TAVVPKIIEQ FDHLGHALPA STRTLIAMSD ALQASGVYWL AGLLGLLVLG
QRLLKNPAMR LRWDKTLLRL PVTGRVARGL NTARFSRTLS ILTASSVPLL EGIQTAAAVS
ANRYVEQQLL LAADRVREGS SLRAALAELR LFPPMMLYMI ASGEQSGELE TMLEQAAVNQ
EREFDTQVGL ALGLFEPALV VMMAGVVLFI VIAILEPMLQ LNNMVGM