| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02834 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 2966526 |
|---|
| End bp | 2967089 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | GspH, hypothetical type II secretion protein |
|---|
| Protein accession | ACT44638 |
|---|
| Protein GI | 253978968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000472105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGAAC GCGGATTCAC ACTTCTGGAA ATCATGCTGG TGATTTTCCT TATCGGCCTT
GCCAGTGCGG GCGTGGTGCA GACTTTTGCG ACCGATTCTG AATCGCCCGC GAAAAAAGCG
GCGCAGGATT TTCTGACTCG CTTTGCGCAG TTTAAAGACA GGGCAGTGAT CGAAGGGCAG
ACACTCGGTG TACTAATCGA CCCGCCGGGA TACCAGTTTA TGCAGCGTCG TCAGGGGCAG
TGGTTGCCCG TTTCTGCGAC CCGGTTATCG GCACAGGTTA CGGTGCCGAA ACAGGTGCAG
ATGCTGTTAC AACCCGGAAG TGATATCTGG CAGAAGGAAT ATGCGCTGGA GCTGCAGCGT
CGTCGCCTGA CGCTGCACGA TATTGAACTG GAGCTGCAAA AAGAGGCGAA AAAGAAGACG
CCGCAGATCC GTTTTTCGCC TTTTGAACCC GCCACGCCGT TTACGCTGCG CTTCTACTCG
GCGGCGCAAA ACGCATGTTG GGCGGTAAAA CTGGCACACG ATGGCGCGTT ATCCCTCAAT
CAATGTGATG AGAGGATGCG ATGA
|
|---|
| Protein sequence | MPERGFTLLE IMLVIFLIGL ASAGVVQTFA TDSESPAKKA AQDFLTRFAQ FKDRAVIEGQ
TLGVLIDPPG YQFMQRRQGQ WLPVSATRLS AQVTVPKQVQ MLLQPGSDIW QKEYALELQR
RRLTLHDIEL ELQKEAKKKT PQIRFSPFEP ATPFTLRFYS AAQNACWAVK LAHDGALSLN
QCDERMR
|
|---|
| |