Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_02388 |
Symbol | hda |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | - |
Start bp | 2482556 |
End bp | 2483302 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | DNA replication initiation factor |
Protein accession | ACT44208 |
Protein GI | 253978538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00844744 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTAAACT TCTCGCGATT TTGTGAAATC CTGGTTGAGG TATCTCTGAA CACACCGGCA CAGCTCTCTT TGCCACTTTA TCTTCCTGAC GACGAAACCT TTGCAAGTTT CTGGCCGGGG GATAACTCCT CTTTACTGGC CGCGCTGCAA AACGTGCTGC GTCAGGAACA TAGCGGTTAC ATCTATCTCT GGGCACGCGA AGGCGCGGGG CGCAGCCATC TGCTGCACGC GGCTTGCGCG GAATTGTCGC AGCGTGGCGA TGCGGTGGGC TATGTCCCGC TGGATAAACG CACCTGGTTT GTTCCGGAAG TGCTCGACGG TATGGAGCAT TTGTCGCTGG TCTGTATCGA CAACATTGAG TGTATTGCAG GCGATGAGTT GTGGGAGATG GCGATTTTCG ATCTCTACAA TCGAATTCTG GAATCGGGCA AAACACGGTT GTTGATCACC GGCGATCGTC CACCGCGGCA GTTGAATCTG GGATTACCGG ATCTCGCGTC GCGACTCGAC TGGGGGCAGA TCTACAAATT GCAGCCACTT TCTGATGAAG ATAAGTTGCA GGCGCTACAG TTACGCGCGC GTTTGCGTGG TTTTGAACTG CCGGAAGATG TGGGGCGTTT CTTGCTGAAG CGGCTCGACA GAGAAATGCG CACGCTATTT ATGACGTTGG ATCAGTTGGA TCGTGCGTCG ATTACCGCGC AACGTAAGCT GACCATTCCG TTTGTGAAAG AAATTCTGAA GTTGTAG
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Protein sequence | MVNFSRFCEI LVEVSLNTPA QLSLPLYLPD DETFASFWPG DNSSLLAALQ NVLRQEHSGY IYLWAREGAG RSHLLHAACA ELSQRGDAVG YVPLDKRTWF VPEVLDGMEH LSLVCIDNIE CIAGDELWEM AIFDLYNRIL ESGKTRLLIT GDRPPRQLNL GLPDLASRLD WGQIYKLQPL SDEDKLQALQ LRARLRGFEL PEDVGRFLLK RLDREMRTLF MTLDQLDRAS ITAQRKLTIP FVKEILKL
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