| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_02142 |
|---|
| Symbol | ompC |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 2205411 |
|---|
| End bp | 2206346 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | outer membrane porin protein C |
|---|
| Protein accession | ACT43965 |
|---|
| Protein GI | 253978295 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTG GCTTCAAAGG TGAAACTCAG GTTACTGACC AGCTGACCGG TTACGGCCAG
TGGGAATATC AGATCCAGGG CAACAGCGCT GAAAACGAAA ACAACTCCTG GACCCGTGTG
GCATTCGCAG GTCTGAAATT CCAGGATGTG GGTTCTTTCG ACTACGGTCG TAACTACGGC
GTTGTTTATG ACGTAACTTC CTGGACCGAC GTACTGCCAG AATTCGGTGG TGACACCTAC
GGTTCTGACA ACTTCATGCA GCAGCGTGGT AACGGCTTCG CGACCTACCG TAACACTGAC
TTCTTCGGTC TGGTTGACGG CCTGAACTTT GCTGTTCAGT ACCAGGGTAA AAACGGCAAC
CCATCTGGTG AAGGCTTTAC TAGTGGCGTA ACTAACAACG GTCGTGACGC ACTGCGTCAA
AACGGCGACG GCGTCGGCGG TTCTATCACT TATGATTACG AAGGTTTCGG TATCGGTGGT
GCGATCTCCA GCTCCAAACG TACTGATGCT CAGAACACCG CTGCTTACAT CGGTAACGGC
GACCGTGCTG AAACCTACAC TGGTGGTCTG AAATACGACG CTAACAACAT CTACCGGGCT
GCTCAGTACA CCCAGACCTA CAACGCAACT CGCGTAGGTT CCCTGGGTTG GGCGAACAAA
GCACAGAACT TCGAAGCTGT TGCTCAGTAC CAGTTCGACT TCGGTCTGCG TCCGTCCCTG
GCTTACCTGC AGTCTAAAGG TAAAAACCTG GGTCGTGGCT ACGACGACGA AGATATCCTG
AAATATGTTG ATGTTGGTGC TACCTACTAC TTCAACAAAA ACATGTCCAC CTACGTTGAC
TACAAAATCA ACCTGCTGGA CGACAACCAG TTCACTCGTG ACGCTGGCAT CAACACTGAT
AACATCGTAG CTCTGGGTCT GGTTTACCAG TTCTAA
|
|---|
| Protein sequence | MRLGFKGETQ VTDQLTGYGQ WEYQIQGNSA ENENNSWTRV AFAGLKFQDV GSFDYGRNYG
VVYDVTSWTD VLPEFGGDTY GSDNFMQQRG NGFATYRNTD FFGLVDGLNF AVQYQGKNGN
PSGEGFTSGV TNNGRDALRQ NGDGVGGSIT YDYEGFGIGG AISSSKRTDA QNTAAYIGNG
DRAETYTGGL KYDANNIYRA AQYTQTYNAT RVGSLGWANK AQNFEAVAQY QFDFGLRPSL
AYLQSKGKNL GRGYDDEDIL KYVDVGATYY FNKNMSTYVD YKINLLDDNQ FTRDAGINTD
NIVALGLVYQ F
|
|---|
| |