| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_01627 |
|---|
| Symbol | ydhP |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | - |
|---|
| Start bp | 1681390 |
|---|
| End bp | 1682559 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | putative transport protein (MFS family) |
|---|
| Protein accession | ACT43485 |
|---|
| Protein GI | 253977815 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA ACTATCCGTT GCTGGCGCTG GCGATTGGCG CGTTTGGTAT CGGGACAACG
GAGTTCTCGC CAATGGGCTT GTTGCCCGTC ATTGCGCGCG GTGTGGATGT CTCGATTCCC
GCTGCCGGAA TGTTAATCAG TGCCTATGCA GTTGGCGTAA TGGTGGGCGC GCCGCTGATG
ACGCTTCTAC TTTCTCATCG TGCCCGCCGC AGTGCGTTGA TTTTCCTGAT GGCAATTTTC
ACGCTAGGCA ACGTTCTTTC CGCCATCGCG CCGGATTATA TGACCCTGAT GCTTTCACGC
ATTTTGACCA GCCTGAATCA CGGAGCATTT TTTGGTTTGG GTTCAGTCGT GGCCGCAAGC
GTGGTGCCAA AACATAAACA GGCCAGCGCA GTTGCCACTA TGTTTATGGG GTTAACCCTG
GCAAATATCG GTGGCGTGCC GGCGGCGACC TGGTTGGGTG AAACCATCGG CTGGCGGATG
TCATTTCTGG CAACGGCGGG GCTGGGAGTG ATTTCAATGG TAAGTCTGTT CTTCTCATTA
CCTAAAGGTG GTGCAGGGGC ACGACCTGAA GTGAAAAAAG AGCTGGCGGT ATTAATGCGT
CCGCAGGTGC TGTCTGCATT GCTGACGACG GTACTGGGAG CTGGTGCAAT GTTTACTCTC
TACACCTATA TCTCTCCGGT ACTGCAAAGT ATTACCCACG CAACACCGGT GTTCGTCACG
GCAATGCTGG TGCTGATTGG TGTCGGATTC TCTATCGGTA ACTATCTCGG CGGCAAACTG
GCAGATCGTT CAGTTAACGG CACGTTGAAA GGCTTTTTGT TGCTGCTGAT GGTGATTATG
CTGGCAATCC CGTTCCTGGC CCGCAATGAG TTCGGCGCAG CTATTAGCAT GGTGGTGTGG
GGCGCAGCAA CCTTTGCGGT CGTACCGCCG TTACAGATGC GCGTGATGCG TGTCGCCAGT
GAAGCGCCGG GTCTGTCTTC ATCAGTCAAT ATTGGTGCCT TTAATCTTGG AAATGCGCTG
GGAGCAGCTG CTGGTGGTGC GGTAATTTCC GCTGGGCTGG GATACAGCTT TGTGCCGGTG
ATGGGAGCGA TTGTCGCGGG ACTGGCATTA TTGCTGGTGT TTATGTCAGC CAGAAAACAA
CCTGAAACAG TTTGCGTTGC TAACAGCTAA
|
|---|
| Protein sequence | MKINYPLLAL AIGAFGIGTT EFSPMGLLPV IARGVDVSIP AAGMLISAYA VGVMVGAPLM
TLLLSHRARR SALIFLMAIF TLGNVLSAIA PDYMTLMLSR ILTSLNHGAF FGLGSVVAAS
VVPKHKQASA VATMFMGLTL ANIGGVPAAT WLGETIGWRM SFLATAGLGV ISMVSLFFSL
PKGGAGARPE VKKELAVLMR PQVLSALLTT VLGAGAMFTL YTYISPVLQS ITHATPVFVT
AMLVLIGVGF SIGNYLGGKL ADRSVNGTLK GFLLLLMVIM LAIPFLARNE FGAAISMVVW
GAATFAVVPP LQMRVMRVAS EAPGLSSSVN IGAFNLGNAL GAAAGGAVIS AGLGYSFVPV
MGAIVAGLAL LLVFMSARKQ PETVCVANS
|
|---|
| |