Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_01396 |
Symbol | ydcR |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 1464066 |
End bp | 1465472 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | fused predicted DNA-binding transcriptional regulator/predicted amino transferase |
Protein accession | ACT43279 |
Protein GI | 253977609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ACCAGCAGCT TGCAGAACAA TTACGCGAGC AGATTGCGTC GGGTATCTGG CAACCCGGCG ATCGTTTGCC TTCGTTGCGT GACCAGGTGG CGCTTTCAGG CATGAGCTTT ATGACTGTCA GCCATGCCTA TCAGTTGCTC GAAAGTCAGG GATATATCAT CGCACGACCG CAGTCGGGTT ATTACGTTGC GCCACAGGCA ATAAAAATGC CGAAAGCGCC AGTCATTCCA GTCACTCGAG ATGAAGCAGT CGATATCAAC ACTTATATTT TTGATATGTT GCAGGCCAGT CGCGATCCGT CGGTCGTTCC GTTTGCCTCG GCCTTTCCCG ACCCGCGACT TTTCCCCCTC CAACAACTAA ACCGCTCGCT GGCGCAGGTA AGCAAAACCG CCACAGCGAT GAGCGTGATT GAAAACTTAC CGCCAGGAAA CGCAGAACTG CGTCAGGCTA TTGCTCGTCG CTATGCCTTA CAGGGCATCA CCATTTCTCC TGATGAAATT GTCATTACTG CCGGGGCGTT AGAGGCATTA AACCTCAGTT TGCAAGCGGT AACTGAACCG GGCGATTGGG TGATAGTAGA GAATCCTTGT TTCTACGGTG CGTTGCAGGC GCTGGAGCGG CTACGGCTGA AGGCGTTATC GGTGGCGACG GATGTTAAAG AAGGGATAGA TCTTCAGGCG CTGGAACTGG CGTTGCAGGA GTATCCGGTG AAAGCGTGCT GGCTGATGAC TAATAGCCAG AATCCACTCG GATTTACCTT AACGCCGCAA AAAAAAGCAC AACTGGTGGC GTTGCTCAAT CAGTACAACG TAACGCTGAT TGAAGATGAC GTTTACAGCG AACTTTATTT TGGACGGGAA AAACCGCTGC CTGCGAAAGC GTGGGATCGC CACGATGGCG TTTTGCATTG CTCTTCGTTT TCGAAATGTC TGGTGCCTGG TTTTCGTATT GGTTGGGTCG CCGCCGGAAA ACATGCACGT AAAATTCAAC GCTTGCAGTT GATGAGTACG CTTTCCACCA GCTCACCGAT GCAACTTGCG CTGGTGGATT ACCTTTCCAC GCGCCGATAC GACGCCCATC TTCGTCGCCT GCGTCGCCAG CTTGCGGAAC GTAAACAACG TGCCTGGCAG GCACTGCTGC GTTATCTGCC TGCGGAAGTG AAAATTCATC ATAATGACAG TGGTTACTTT CTCTGGCTGG AGCTCCCCGA GCCGTTAGAT GCCGGCGAAT TAAGCCTGGC GGCACTGACG CATCATATCA GTATTGCGCC GGGTAAAATG TTTTCTACCG GTGAAAACTG GTCACGTTTT TTCCGTTTTA ATACCGCGTG GCAGTGGGGA GAGCGTGAAG AACAGGCGGT AAAACAATTA GGCAAACTTA TTCAAGAACG GCTGTAA
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Protein sequence | MKKYQQLAEQ LREQIASGIW QPGDRLPSLR DQVALSGMSF MTVSHAYQLL ESQGYIIARP QSGYYVAPQA IKMPKAPVIP VTRDEAVDIN TYIFDMLQAS RDPSVVPFAS AFPDPRLFPL QQLNRSLAQV SKTATAMSVI ENLPPGNAEL RQAIARRYAL QGITISPDEI VITAGALEAL NLSLQAVTEP GDWVIVENPC FYGALQALER LRLKALSVAT DVKEGIDLQA LELALQEYPV KACWLMTNSQ NPLGFTLTPQ KKAQLVALLN QYNVTLIEDD VYSELYFGRE KPLPAKAWDR HDGVLHCSSF SKCLVPGFRI GWVAAGKHAR KIQRLQLMST LSTSSPMQLA LVDYLSTRRY DAHLRRLRRQ LAERKQRAWQ ALLRYLPAEV KIHHNDSGYF LWLELPEPLD AGELSLAALT HHISIAPGKM FSTGENWSRF FRFNTAWQWG EREEQAVKQL GKLIQERL
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