Gene ECD_01123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECD_01123 
SymbolpotB 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli BL21(DE3) 
KingdomBacteria 
Replicon accessionCP001509 
Strand
Start bp1186985 
End bp1187812 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content51% 
IMG OID 
Productspermidine/putrescine ABC transporter membrane protein 
Protein accessionACT43017 
Protein GI253977347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTCA CTATTGTCGG TTGGCTTGTG TTGTTTGTCT TTCTGCCCAA CCTGATGATC 
ATTGGCACCA GCTTTTTGAC CCGCGACGAC GCCAGTTTCG TCAAAATGGT CTTTACGCTG
GATAACTACA CGCGTCTGCT CGATCCGCTC TATTTTGAAG TGCTATTGCA CTCGCTGAAT
ATGGCGCTGA TCGCCACCCT CGCCTGCCTG GTGCTGGGCT ACCCGTTTGC CTGGTTTCTG
GCGAAGCTGC CACACAAGGT GCGTCCGCTG CTGCTGTTTC TGCTGATTGT TCCCTTCTGG
ACCAACTCAC TGATTCGCAT CTACGGGCTG AAAATTTTCC TCAGCACCAA AGGCTATCTC
AACGAGTTTT TGCTCTGGCT GGGCGTTATC GACACACCAA TTCGTATCAT GTTCACGCCC
AGTGCGGTGA TTATCGGTCT GGTTTACATT CTGCTACCGT TTATGGTGAT GCCGCTGTAC
TCCAGTATCG AAAAACTGGA TAAGCCGTTG CTTGAGGCGG CGCGCGATCT CGGTGCCAGC
AAGTTACAGA CTTTTATCCG TATCATTATT CCACTGACGA TGCCGGGAAT TATTGCCGGA
TGTCTGCTGG TGATGCTGCC AGCGATGGGC CTGTTCTATG TGTCCGACCT GATGGGCGGT
GCGAAAAACC TGCTGATCGG TAACGTCATC AAGGTACAGT TCCTCAATAT TCGTGACTGG
CCGTTTGGTG CAGCCACCAG CATTACGCTG ACTATCGTAA TGGGCCTGAT GTTGCTGGTT
TACTGGCGCG CTTCTCGTCT GCTGAATAAA AAGGTGGAAC TCGAATGA
 
Protein sequence
MIVTIVGWLV LFVFLPNLMI IGTSFLTRDD ASFVKMVFTL DNYTRLLDPL YFEVLLHSLN 
MALIATLACL VLGYPFAWFL AKLPHKVRPL LLFLLIVPFW TNSLIRIYGL KIFLSTKGYL
NEFLLWLGVI DTPIRIMFTP SAVIIGLVYI LLPFMVMPLY SSIEKLDKPL LEAARDLGAS
KLQTFIRIII PLTMPGIIAG CLLVMLPAMG LFYVSDLMGG AKNLLIGNVI KVQFLNIRDW
PFGAATSITL TIVMGLMLLV YWRASRLLNK KVELE